PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0140.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 210aa    MW: 23749.2 Da    PI: 10.2763
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0140.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.46e-211965349
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                          e +sn  vtfskRr g++KKA+EL++LC++++a+i+fs+  k++ +
  Kaladp0062s0140.1.p 19 MEKESNLLVTFSKRRSGLFKKASELCTLCGVQIAIIVFSPGKKVFSF 65
                         57889999********************************9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDQVEKKNKG RRKIRMAKME KESNLLVTFS KRRSGLFKKA SELCTLCGVQ IAIIVFSPGK  60
KVFSFGHPNV ETIVDRYLTR TTSPNFSSPT PNNNTNIAMM EAHRSSKIRE LNAEVTEATN  120
QLEGEKKRGE AMDKMRKMNQ NKCWWENNVC ELNLSQLHQL RIALEGLKID VGKEAGKRVM  180
GPSTSNQIIP YMGIDYNGNY SNSNGFNHF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-51M-type_MADS family protein