PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0126.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 264aa    MW: 28707.9 Da    PI: 5.0082
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0126.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.4e-162368148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg++T+eE++l ++++  lG++ W++Ia+ ++ gRt++++k+ w+++l
  Kaladp0062s0126.1.p 23 RGPFTEEEEKLVIQLHGILGNR-WAAIAAQLP-GRTDNEIKNLWNTHL 68
                         89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDCEETSNVE IKKWESHQRN IKRGPFTEEE EKLVIQLHGI LGNRWAAIAA QLPGRTDNEI  60
KNLWNTHLKK RLLCMGIDPQ THEPFVTCYG PALAPAAPPS TRHMAQWESA RLEAEARLSR  120
ESLLFGAPTP PSDNPSDHFL RLWNSEVGAA FRFQAKRAGA SSTSSSHHSQ LSSTLKGCCD  180
SVSGTTTEMA STAVTKIQKE EMDTDAVAAA GSASSSSDEL DDSSDSALQL LMDYPFNNDM  240
SFLTDHISDY SSFPSMCPGS SGP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.17e-69MYB family protein