PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0443.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 407aa MW: 44131.5 Da PI: 7.4112

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0443.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.2	1.3e-06	3	44	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 r+C+ ++e++ +C++++ +lC +C + H+ H++ Kaladp0060s0443.1.p 3 RTCDFCGEQRSMVYCRSDSACLCLSCDRNVHSAnalsnrHSR 44 79*****************************65677777765 PP
2	zf-B_box	25.3	3.1e-08	46	89	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+++ +++++ C+d + lC++C ++H + H++++ Kaladp0060s0443.1.p 46 LLCERCTSQPAIVRCHDENASLCQNCDWSGHGNasaastHKRQT 89 57*****************************6689999999876 PP
3	CCT	64.7	2.7e-22	349	392	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RYkeK+k+RkF+KkirY+sRK++A+ R+RvKGrFvk+ Kaladp0060s0443.1.p 349 RDNAVKRYKEKKKNRKFDKKIRYASRKERADVRKRVKGRFVKAG 392 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MGRTCDFCGE QRSMVYCRSD SACLCLSCDR NVHSANALSN RHSRTLLCER CTSQPAIVRC 60 HDENASLCQN CDWSGHGNAS AASTHKRQTI NCYSGCPSAA ELSRIWSFVL DIASAGDLDS 120 KTGAGSVAET CAGSANLEKK SITSLPEASQ IIELESKSAV LMPSSAMGAP KSTTLLKELP 180 SPPKQCCSIT EDIQSFDVDD NLFGDFSMAD VDLSIENYEE LFGYSQNFSE HLFENGGMAS 240 LFPKRNIPEV GTSTQGAKGA KGPAAVRTNT MQPSCSNPMS VDSLVSCKTD PIVYPARKDN 300 SGVTLSFSGM TNESSNGEYQ DCGISPVVAM GEPPWCPSGT ENSLTSASRD NAVKRYKEKK 360 KNRKFDKKIR YASRKERADV RKRVKGRFVK AGERYDYDPL CPTRSF*

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MGRTCDFCGE QRSMVYCRSD SACLCLSCDR NVHSANALSN RHSRTLLCER CTSQPAIVRC  60
HDENASLCQN CDWSGHGNAS AASTHKRQTI NCYSGCPSAA ELSRIWSFVL DIASAGDLDS  120
KTGAGSVAET CAGSANLEKK SITSLPEASQ IIELESKSAV LMPSSAMGAP KSTTLLKELP  180
SPPKQCCSIT EDIQSFDVDD NLFGDFSMAD VDLSIENYEE LFGYSQNFSE HLFENGGMAS  240
LFPKRNIPEV GTSTQGAKGA KGPAAVRTNT MQPSCSNPMS VDSLVSCKTD PIVYPARKDN  300
SGVTLSFSGM TNESSNGEYQ DCGISPVVAM GEPPWCPSGT ENSLTSASRD NAVKRYKEKK  360
KNRKFDKKIR YASRKERADV RKRVKGRFVK AGERYDYDPL CPTRSF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-119	CO-like family protein