PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0059s0023.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 338aa    MW: 37448.8 Da    PI: 9.9686
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0059s0023.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF35.99.6e-121255245
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                         ++en s+r vt+skRr+g++KK e   + ++ +v  ++fs  gk
  Kaladp0059s0023.1.p 12 KVENISRRRVTLSKRRQGLFKKMEKFGIVTGFDVTAVVFSVAGK 55
                         689*************************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGTGRKKINI EKVENISRRR VTLSKRRQGL FKKMEKFGIV TGFDVTAVVF SVAGKPMMFG  60
DIIVFQRFMT EVLGSGGDFE FDEETAGNTR LGFEKLGEEV KECLHCKTLV MIRNKLIELK  120
DKLKGVLSDE ETEARAKQSS LSLLKALRDT EKKKLDFLEK SLKEITTLCD VDALFVCATK  180
SNKSSESSFY TYPDDKHTVR KLIIKCCDYF RKPIIVDKVL PHSIVCGKPM SDIAAKNPVS  240
RIAVSAEKRP TPQSTVTAEK LMSPSISTAE KVLAATSSKS ELVKKANSII KLSNLKLAML  300
KEAKVANEEH GMHRAGSTEA EVLEGSSGKL LPYIKFL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.14e-14M-type_MADS family protein