PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0349.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 320aa    MW: 34373.8 Da    PI: 9.577
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0349.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.61.2e-1260104147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          r++WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  Kaladp0055s0349.1.p  60 RQSWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 104
                          899*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MVSKSSNPPD AFYLDPTGAA LPGLSPFAPT GGGGAIGVAS AAGEDGDKKV RKPYTITKSR  60
QSWTEPEHDK FLEALQLFDR DWKKIEAFIG SKTVIQIRSH AQKYFLKVQK SGGNEHLPPP  120
RPKRKAAHPY PHKASKSVPA LPELRGALLS SASASSLPHP GYVLKHDVHS IPSDPSSRAA  180
VASSWTDSSA QASAIPNASQ GDLKSTAEAM AINSSNSAES NLRVQSVSRT PVQANKSQAI  240
RVLPDFAQVY GFIGSVFDPN VSGHLQNLKQ MDPIDVETVL LLMRNLSINL TSPAFEDHRK  300
ILSTYEFDPK EPSYDVIGI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-88MYB_related family protein