PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0051s0099.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 672aa MW: 74985 Da PI: 5.8647

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0051s0099.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4.2e-10	622	668	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 rW+ E++ l +v+++G+g+Wk I t + Rt+ ++k++w+ Kaladp0051s0099.1.p 622 RWSLLEEDTLRAGVQRFGKGNWKMILVTYRdifEERTDVDLKDKWRR 668 9********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MGSGGIVDKW LVELAIRTAK DDKVVAKTLS LAPRLRDDVG LKKIVLLRGI ESEMDEGSVS 60 ERMLDALEVA FELDRRQGLD VLESMKVAYC SVAVDCVARF VKSVGGGDVY LKAVERVWRR 120 RIGPLIALNV DLVSEQLESW RDTVESAIWD DNVRDKLFVT NTRYEALVAI KGYLDEAWKI 180 VGPSFLELLA SSELGKSLVK AQQQLCLPSI SEPSEGEPQR PFDMPGIFNH NAQVLSDPSN 240 LVSCNDQEDV AKILTQNLGD NSKSPADIYH KEVSEASFCA HTVNRHLDEN MRLADCGIAE 300 EQNLLQSSSG LARDQSDNVE LVHVKSKVAE DATLPLPGVC ATNSFVCDDH LKGAGTDFVN 360 ELKADLRSSS AQGNLQSLNN SKAHYKDTRK LRVRSKHVGR PNKRPKPVRV NNSEDWDLEG 420 LDTQYHPLPE NEVIKVREEL KSSSRELQAA VKDPLPDALR VAEAVISDVS RNCIPQGAPA 480 ASITDRETPN FQDVEVDRGR DKASTSHSAE VITSNTEGKT MNLRTNKSYE RDPRDAAGNA 540 SPPETVGDGD NNVQNEGSRH GNRRQRANLW ERDASARTYE WDDSIDGSQE ENYGLPTPKT 600 HVNPPRKNNG SVKYARRRHI KRWSLLEEDT LRAGVQRFGK GNWKMILVTY RDIFEERTDV 660 DLKDKWRRMT K*

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MGSGGIVDKW LVELAIRTAK DDKVVAKTLS LAPRLRDDVG LKKIVLLRGI ESEMDEGSVS  60
ERMLDALEVA FELDRRQGLD VLESMKVAYC SVAVDCVARF VKSVGGGDVY LKAVERVWRR  120
RIGPLIALNV DLVSEQLESW RDTVESAIWD DNVRDKLFVT NTRYEALVAI KGYLDEAWKI  180
VGPSFLELLA SSELGKSLVK AQQQLCLPSI SEPSEGEPQR PFDMPGIFNH NAQVLSDPSN  240
LVSCNDQEDV AKILTQNLGD NSKSPADIYH KEVSEASFCA HTVNRHLDEN MRLADCGIAE  300
EQNLLQSSSG LARDQSDNVE LVHVKSKVAE DATLPLPGVC ATNSFVCDDH LKGAGTDFVN  360
ELKADLRSSS AQGNLQSLNN SKAHYKDTRK LRVRSKHVGR PNKRPKPVRV NNSEDWDLEG  420
LDTQYHPLPE NEVIKVREEL KSSSRELQAA VKDPLPDALR VAEAVISDVS RNCIPQGAPA  480
ASITDRETPN FQDVEVDRGR DKASTSHSAE VITSNTEGKT MNLRTNKSYE RDPRDAAGNA  540
SPPETVGDGD NNVQNEGSRH GNRRQRANLW ERDASARTYE WDDSIDGSQE ENYGLPTPKT  600
HVNPPRKNNG SVKYARRRHI KRWSLLEEDT LRAGVQRFGK GNWKMILVTY RDIFEERTDV  660
DLKDKWRRMT K*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	2e-23	MYB_related family protein