PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0933.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 337aa    MW: 36311.6 Da    PI: 7.3249
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0933.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-1289133347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+ l++ + ++lG+g+W+ I+rt    Rt+ q+ s+ qky
  Kaladp0048s0933.2.p  89 PWTEEEHRLFLLGLQKLGKGDWRGISRTYVISRTPTQVASHAQKY 133
                          7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKIFGVRL TDGLIRKSAS MGNLTHCAGS NLNGSALAGS  60
PGDAPDHGDG YASEDLAASG SREKKKGIPW TEEEHRLFLL GLQKLGKGDW RGISRTYVIS  120
RTPTQVASHA QKYFIRQSNV SRRKRRSSLF DIVADESVEM PMETLEENPQ NHAESQSSYQ  180
LPPVPAPHIP TFPAPEEENE SMDSATNSND GDFSLPMPES APTYYPVPVI VPAYVSPFFP  240
FSVPYWPDNR SAEMSEATKP HVVLKPTAVQ PKSPINVDEL LGMSKLSLGV ESKSEAGPSA  300
SPSLSLKLSE GSSRQSAFQA NPAPGTSASS NPIRAL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.16e-97MYB_related family protein