PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0933.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 338aa    MW: 36382.6 Da    PI: 7.3249
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0933.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-1290134347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+ l++ + ++lG+g+W+ I+rt    Rt+ q+ s+ qky
  Kaladp0048s0933.1.p  90 PWTEEEHRLFLLGLQKLGKGDWRGISRTYVISRTPTQVASHAQKY 134
                          7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKIFGVRL TDGLIRKSAS MGNLTHCAGS NLNGSALAGS  60
PGDAPDHGDG YASEDLAASG SREKKKAGIP WTEEEHRLFL LGLQKLGKGD WRGISRTYVI  120
SRTPTQVASH AQKYFIRQSN VSRRKRRSSL FDIVADESVE MPMETLEENP QNHAESQSSY  180
QLPPVPAPHI PTFPAPEEEN ESMDSATNSN DGDFSLPMPE SAPTYYPVPV IVPAYVSPFF  240
PFSVPYWPDN RSAEMSEATK PHVVLKPTAV QPKSPINVDE LLGMSKLSLG VESKSEAGPS  300
ASPSLSLKLS EGSSRQSAFQ ANPAPGTSAS SNPIRAL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.14e-95MYB_related family protein