PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0257.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 164aa    MW: 18501.9 Da    PI: 10.6715
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0257.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.81.2e-083341647
                         HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqky 47
                          k++G+g+W+ Iar + ++Rt+ q+ s+ qky
  Kaladp0048s0257.1.p  3 LKKYGKGDWRNIARNFVTTRTPTQVASHAQKY 34
                         79*****************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MGLKKYGKGD WRNIARNFVT TRTPTQVASH AQKYFIRQLN RGKDKRRSSI HDITIVNLKD  60
HASPSADTNK DLLQDQPSSV EKSRQPSDLV CLTQTFYSPK VANRESLMVF NSSTENSFMT  120
STPRTATYGH SLKEQTMHRS IFLGSQCGAQ TMVFHVPSVQ HRQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-35MYB family protein