PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0199.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 396aa MW: 42815.1 Da PI: 7.619

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0199.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.9	3e-41	75	221	1	120
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg. 88 +a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ Kaladp0048s0199.1.p 75 PAPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSIPs 164 589*******************************************************************99988888888888777777 PP TCP 89 ..........................kaaksaa.kskksqksaasalnlakesrakara 120 ++++s++ +s++ ++ l + ++++++ r+ Kaladp0048s0199.1.p 165 qlrstyfnpsfsipqqrrtlfpglglSSSTSSTiLDFQSNHGNN--LGILQQTKQELRE 221 77777777777788888788888887444444423333333333..4444444444333 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MEGGGDDHHH THNSHHHIFQ RSNNFPFQLL EKKEDDQSAA CSSSGYPPSN SLAIVSSTTT 60 NNNPDPTQPD PTKKPAPKRT STKDRHTKVD GRGRRIRMPA LCAARVFQLT RELGHKSDGE 120 TIEWLLQQAE PAVIAATGTG TIPANFTSLN ISLRSSGSSM SIPSQLRSTY FNPSFSIPQQ 180 RRTLFPGLGL SSSTSSTILD FQSNHGNNLG ILQQTKQELR ETTSSTLDLS EDDSHLSRKR 240 RTPEQEMPPS SPPQHQLNNY LLQSTSSGVI PASHGQIPAN IWMLANPNNN QIENPIWTFP 300 PQVSSNNAAA AAAALYRGTM SSGLHFMNFP TPVALLGSGQ HLGPGQGSSG LGPGNNSMNE 360 NHLNIFGGLN PYRSVSGSDN RASGSQSHHE DERHD*

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MEGGGDDHHH THNSHHHIFQ RSNNFPFQLL EKKEDDQSAA CSSSGYPPSN SLAIVSSTTT  60
NNNPDPTQPD PTKKPAPKRT STKDRHTKVD GRGRRIRMPA LCAARVFQLT RELGHKSDGE  120
TIEWLLQQAE PAVIAATGTG TIPANFTSLN ISLRSSGSSM SIPSQLRSTY FNPSFSIPQQ  180
RRTLFPGLGL SSSTSSTILD FQSNHGNNLG ILQQTKQELR ETTSSTLDLS EDDSHLSRKR  240
RTPEQEMPPS SPPQHQLNNY LLQSTSSGVI PASHGQIPAN IWMLANPNNN QIENPIWTFP  300
PQVSSNNAAA AAAALYRGTM SSGLHFMNFP TPVALLGSGQ HLGPGQGSSG LGPGNNSMNE  360
NHLNIFGGLN PYRSVSGSDN RASGSQSHHE DERHD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	242	SRKRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-41	TCP family protein