PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0116.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 65aa    MW: 7376.17 Da    PI: 5.6272
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0116.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.9e-161655141
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
                         rg W +eEd+ll ++v+++G+++W+tIa+ ++ gRt++q++
  Kaladp0048s0116.1.p 16 RGHWRPEEDQLLRNLVERFGPKNWNTIAEQVQ-GRTGNQLI 55
                         899*****************************.******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    
MEGHEGDNDN QGATSRGHWR PEEDQLLRNL VERFGPKNWN TIAEQVQGRT GNQLIKPFVP  60
FVFI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.13e-14MYB family protein