PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0048s0034.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 491aa MW: 55776.9 Da PI: 7.6773

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0048s0034.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.6	3.4e-09	391	438	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 W++ E +l+++v+++G g+W+ I r + ++Rt ++k++w+++l Kaladp0048s0034.1.p 391 WSEYEITILIEGVAKYGVGRWTEIKRGLFpptTRRTSVDLKDKWRNLL 438 ************************99889*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MVDVPKDMSY RNNERDKRYT YELLEFKEYD TFPPIPEDEL MGLEFLLAEP SCNDGLVEPF 60 LGVCLPNSQK CFVTEDRRDH KKITNGTETS DRIPIHEDQH QEDNDGQVQG TDEGILLEMN 120 NLPSICEDYL FDCKLGGELA MLDCDSSKKL LINQPNELRS DNGKEFDATI GYYCNSATEM 180 LNKSMKKCRN LAIGSGPGWQ SSAILSHIKT KSEVVSQGEE PLISDSVATF SSIVNDGSPH 240 WRDNDAFFTK KRPRKRPMRF IDEYSKYHSV HANKRSGGLS KNSKEKTARA KSRYQDCLKQ 300 DVRERKQVSH NEYMTEAIQV PFGPLMLKEC SRKKASVPLG HEDCSKAIVT FSGVNTITEL 360 SLAPSLDERS DDNDVGDVPR DKSGRKHNRY WSEYEITILI EGVAKYGVGR WTEIKRGLFP 420 PTTRRTSVDL KDKWRNLLKA STAQLRSKNE GRRVTHQQVP QSVLRQVKEL AVMHPYPKNP 480 SPKNALTVRC *

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MVDVPKDMSY RNNERDKRYT YELLEFKEYD TFPPIPEDEL MGLEFLLAEP SCNDGLVEPF  60
LGVCLPNSQK CFVTEDRRDH KKITNGTETS DRIPIHEDQH QEDNDGQVQG TDEGILLEMN  120
NLPSICEDYL FDCKLGGELA MLDCDSSKKL LINQPNELRS DNGKEFDATI GYYCNSATEM  180
LNKSMKKCRN LAIGSGPGWQ SSAILSHIKT KSEVVSQGEE PLISDSVATF SSIVNDGSPH  240
WRDNDAFFTK KRPRKRPMRF IDEYSKYHSV HANKRSGGLS KNSKEKTARA KSRYQDCLKQ  300
DVRERKQVSH NEYMTEAIQV PFGPLMLKEC SRKKASVPLG HEDCSKAIVT FSGVNTITEL  360
SLAPSLDERS DDNDVGDVPR DKSGRKHNRY WSEYEITILI EGVAKYGVGR WTEIKRGLFP  420
PTTRRTSVDL KDKWRNLLKA STAQLRSKNE GRRVTHQQVP QSVLRQVKEL AVMHPYPKNP  480
SPKNALTVRC *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-24	MYB_related family protein