PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0046s0310.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 558aa MW: 61998.3 Da PI: 6.7187

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0046s0310.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.5e-05	459	479	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C++Cgk F ++ ++++H+++ H Kaladp0046s0310.2.p 459 CEKCGKAF-QQAEMEKHMKVfH 479 ******.********988 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MDFELRRARE KLEKEQKERK EKARLKLERE RKAKLEAFRQ QEAIEAARRT RRIDAAEAQL 60 KADEQMQESL IAGKGIVFHR FLTPVLYEGS GDKIKLPLSC FKELSDQGAF DKGPLYFRLS 120 VVQQNSPSDP NPNGEDTQRS THSGVLEFTV DEDCVALPRH VWNNLFPTAA IAAPLVEVRY 180 VWLPKGVYAK LQPDRIGFSD IPNHKAVLET ILRHHATLSE NDLLTVNHGI LTYTLRVLEL 240 RPSSSVSVLE TDIEVDVVSP DKTSITADQP YLQPLELGKS ESGALDEGNY VYYKFSINGD 300 VWSIIESGDA NVCVKMETGE NDGDTDLYVS RHPLLFPTTH QHQWSSHDVG SKTLTMTAMD 360 ENLGAGSYTV GVYGFKGTSK YKLTVTVEAA ASQKVGLKAT STSQAAEVDT VECRNCKHLI 420 PSRSITLHEA YCSRNNVTCK RPGCGVVLRV GEAKNHVHCE KCGKAFQQAE MEKHMKVFHE 480 PLQCPCGVLL EKEDMVQHQA ADCPLRLITC RFCGDMVQAG NSAIDVRDRM RGLSEHESGC 540 GSRTAPCSTC GRESLKS*

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MDFELRRARE KLEKEQKERK EKARLKLERE RKAKLEAFRQ QEAIEAARRT RRIDAAEAQL  60
KADEQMQESL IAGKGIVFHR FLTPVLYEGS GDKIKLPLSC FKELSDQGAF DKGPLYFRLS  120
VVQQNSPSDP NPNGEDTQRS THSGVLEFTV DEDCVALPRH VWNNLFPTAA IAAPLVEVRY  180
VWLPKGVYAK LQPDRIGFSD IPNHKAVLET ILRHHATLSE NDLLTVNHGI LTYTLRVLEL  240
RPSSSVSVLE TDIEVDVVSP DKTSITADQP YLQPLELGKS ESGALDEGNY VYYKFSINGD  300
VWSIIESGDA NVCVKMETGE NDGDTDLYVS RHPLLFPTTH QHQWSSHDVG SKTLTMTAMD  360
ENLGAGSYTV GVYGFKGTSK YKLTVTVEAA ASQKVGLKAT STSQAAEVDT VECRNCKHLI  420
PSRSITLHEA YCSRNNVTCK RPGCGVVLRV GEAKNHVHCE KCGKAFQQAE MEKHMKVFHE  480
PLQCPCGVLL EKEDMVQHQA ADCPLRLITC RFCGDMVQAG NSAIDVRDRM RGLSEHESGC  540
GSRTAPCSTC GRESLKS*