PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0044s0056.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 1235aa MW: 136141 Da PI: 7.63

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0044s0056.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.4	1.8e-06	71	126	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++R ++++ + ++++F+ + ++s++e +e++++ g+t +qV+ +F +R + + Kaladp0044s0056.1.p 71 KKPRDLLNPKAVAYMQSVFAIKDKISKKETREISAQFGITLSQVRDYFASQRSRVR 126 79999***********************************************9977 PP

Sequence ? help Back to Top
Protein Sequence Length: 1235 aa Download sequence
MDGLSARLAA EEEGIGTSME SFQKCLESQK DLFHSQLIEM KRIVSAQCKL TGVNPLSQEM 60 AAGALSIAIG KKPRDLLNPK AVAYMQSVFA IKDKISKKET REISAQFGIT LSQVRDYFAS 120 QRSRVREIVQ SSQEVSRDKS KMLKDLQNGN HENKGSTMHS DPGPFIDAGP VTCDTNIANA 180 VKPEINETAA SSASRPTETD IGTARCDSPE FSLATCIPVT DEDDVTDEPS RSEIATHKST 240 ASTYAEPVPL NVVPPTISET PASNSSGICD ARMQPKLTKG EVLPELDGSD KNFVENIFNL 300 MSKEETFSGQ VNLMEEILKI ESPSVLDWFL SKGGVMILAT WLRQAAVEEQ TSVLHIILKV 360 LCHLPLAKAL PEKMSVILQS VNSLRFYRSQ DISNKARICL ARWSKLFAKS QPMMKLNGVK 420 SQIEVAKLKL LTESINEING DESRQSELEN TDGSLTSSNQ ATENLRKRER PLQMEMLTAS 480 PEDSVKRISM GLSSSQGKGR RKVQLVEHIG QRAIGSSQQA VRASVSQSRP MSTDDIQKAK 540 LRKEVMEAKY GKKKSEPGSH KPGVPSAIVQ ASRVPTQPVP HERRNSKLPL PKNLTEHKPP 600 VTPHPYQTDE KKQNLLPLEN KDELKQPMVP LQNSTVGLKQ PTASFANNTD EQPMMQAVKS 660 IVEQMQTVVP LLNSNMKSQV LPENIAEQIQ ATVSISRSTA EPQVNSNGSA EKREQIISIS 720 NSIVQKVPRP KKTIPETKEP FWKQCKRVQI PWKTPPEMVI DTEWRVGSGQ NSRELRDQKV 780 RNKREKEFVY QRHEEIPPNP KNPWENEIDY DDTLTPIIPT EQLIDTSDPL QSQNSISVET 840 GNTSQMGSVA HTPAPSSLTG TVSGSEHDPV LLNALLKNPA LVFKLTSGQT ANMTSEDTVR 900 LLDMIKATAG AFPIGNVTHN LSNGSRVSEE RVEGSLPSPT PSSNFGTIGW QSEVARKSFS 960 GHSPSRNSGT YAYPGVAAPA YDRHTPATNL SHTQLSSANS YHQLQSPTPQ FPPPQSYGVH 1020 YDNNYNSGLH SPTPHAETIS SVEPFHHPIS TETNMVETRS TVGYNPLRSY SSHPLAQAQQ 1080 QPPPYDHLSQ HAYHPSGPVQ PQQQPIYDLQ GNFQNQTYAT SGQYGNPSSF SDSRRPRGSA 1140 ADSYAQVHSN HFGSSTHWYK NENVTSLNQF ESWSPPHSGP SMSVDYVSGS SQPRTGYGSN 1200 YRLDQSRSMN FPSGYGGSAS QNGNGWWNDH DRRR*

Sequence ? help Back to Top

Protein Sequence Length: 1235 aa Download sequence

MDGLSARLAA EEEGIGTSME SFQKCLESQK DLFHSQLIEM KRIVSAQCKL TGVNPLSQEM  60
AAGALSIAIG KKPRDLLNPK AVAYMQSVFA IKDKISKKET REISAQFGIT LSQVRDYFAS  120
QRSRVREIVQ SSQEVSRDKS KMLKDLQNGN HENKGSTMHS DPGPFIDAGP VTCDTNIANA  180
VKPEINETAA SSASRPTETD IGTARCDSPE FSLATCIPVT DEDDVTDEPS RSEIATHKST  240
ASTYAEPVPL NVVPPTISET PASNSSGICD ARMQPKLTKG EVLPELDGSD KNFVENIFNL  300
MSKEETFSGQ VNLMEEILKI ESPSVLDWFL SKGGVMILAT WLRQAAVEEQ TSVLHIILKV  360
LCHLPLAKAL PEKMSVILQS VNSLRFYRSQ DISNKARICL ARWSKLFAKS QPMMKLNGVK  420
SQIEVAKLKL LTESINEING DESRQSELEN TDGSLTSSNQ ATENLRKRER PLQMEMLTAS  480
PEDSVKRISM GLSSSQGKGR RKVQLVEHIG QRAIGSSQQA VRASVSQSRP MSTDDIQKAK  540
LRKEVMEAKY GKKKSEPGSH KPGVPSAIVQ ASRVPTQPVP HERRNSKLPL PKNLTEHKPP  600
VTPHPYQTDE KKQNLLPLEN KDELKQPMVP LQNSTVGLKQ PTASFANNTD EQPMMQAVKS  660
IVEQMQTVVP LLNSNMKSQV LPENIAEQIQ ATVSISRSTA EPQVNSNGSA EKREQIISIS  720
NSIVQKVPRP KKTIPETKEP FWKQCKRVQI PWKTPPEMVI DTEWRVGSGQ NSRELRDQKV  780
RNKREKEFVY QRHEEIPPNP KNPWENEIDY DDTLTPIIPT EQLIDTSDPL QSQNSISVET  840
GNTSQMGSVA HTPAPSSLTG TVSGSEHDPV LLNALLKNPA LVFKLTSGQT ANMTSEDTVR  900
LLDMIKATAG AFPIGNVTHN LSNGSRVSEE RVEGSLPSPT PSSNFGTIGW QSEVARKSFS  960
GHSPSRNSGT YAYPGVAAPA YDRHTPATNL SHTQLSSANS YHQLQSPTPQ FPPPQSYGVH  1020
YDNNYNSGLH SPTPHAETIS SVEPFHHPIS TETNMVETRS TVGYNPLRSY SSHPLAQAQQ  1080
QPPPYDHLSQ HAYHPSGPVQ PQQQPIYDLQ GNFQNQTYAT SGQYGNPSSF SDSRRPRGSA  1140
ADSYAQVHSN HFGSSTHWYK NENVTSLNQF ESWSPPHSGP SMSVDYVSGS SQPRTGYGSN  1200
YRLDQSRSMN FPSGYGGSAS QNGNGWWNDH DRRR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-120	HB-other family protein