PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0275.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 362aa    MW: 39337.9 Da    PI: 7.6441
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0275.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14.1e-13120164347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+ l++ + ++lG+g+W+ Iar    +Rt+ q+ s+ qky
  Kaladp0043s0275.1.p 120 PWTEEEHRLFLIGLHKLGKGDWRGIARNYVITRTPTQVASHAQKY 164
                          8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MTRRCSHCSF DGHNSRTCPS RAASSSSSAA ISGSASCGGG GVKLFGVRLT DGSIMKKSAS  60
MGNLSSLAHY NSSPSTAAAS PNPSSPSSDT IGNALPAPDG CLSDDPAHVN RRSDRKKGTP  120
WTEEEHRLFL IGLHKLGKGD WRGIARNYVI TRTPTQVASH AQKYFIRQSN ASRRKRRTSL  180
FDMTPEMETE MPPAPERFLL PPPSSEIDHE NSVSLTNQNP ELHSMELTPE ETVKESDDTS  240
IEEANYFLPA PVVPTFYPAY VPVPFRFWSP NLAPTEEEYP ETSNHQVLKP IPVIPKDPIN  300
VDDLVGMSQL SIKETVKTRA DSHPLSMRLL GSPSRQSAFR PRRSASVPNL TQGSADSNPG  360
E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-75MYB_related family protein