PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0043s0190.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 89aa    MW: 10094.5 Da    PI: 9.0722
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0043s0190.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.8e-171461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd++l  ++k +G g+W++ ++  g+ R++k+c++rw +yl
  Kaladp0043s0190.1.p 14 KGAWTKEEDDRLTAYIKAHGDGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                         79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MGRSPCCEKA HTNKGAWTKE EDDRLTAYIK AHGDGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDVKRGNF THDEDELIIH FHSILGNK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.13e-57MYB family protein