PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0040s0544.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | SRS | ||||||||
Protein Properties | Length: 330aa MW: 35629.7 Da PI: 8.074 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 195.4 | 1.9e-60 | 123 | 277 | 2 | 154 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkl 91 r g++sCqdCGnqakk+C+h+RCRtCC srgfdC+thvkstWvpaakrrerqqq++ + ++ +a+a++++s + s ++ a s ++l Kaladp0040s0544.1.p 123 RRGSISCQDCGNQAKKECVHMRCRTCCMSRGFDCQTHVKSTWVPAAKRRERQQQMKRLRQDPKAAASASNSSLACT--SLTRLAPSPSTL 210 57899**************************************************999888766554444443333..345555555555 PP DUF702 92 ssaeskkeletsslPeevsseavfrcvrvssvdd.g....eeelaYqtavsigGhvfkGiLydqGlee 154 ++ + + +lP+ev+s avf+cvrvs +++ g e++laYqt+v+igGh+f+GiLydqG+++ Kaladp0040s0544.1.p 211 GEG-GRWATVGDELPREVRSCAVFKCVRVSPIEQqGeeglEQQLAYQTSVNIGGHLFRGILYDQGPQN 277 565.456778888*******************984322334679*********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MSGFFSLGGA NPQQPHHLNS SPETLIPPGN WFELRNEKLA ATYRRRGAIE LWHQQACHER 60 SSRSYDISNN PTSTSHLLGF GVGPTSVGAI DTSTQSDDQS VALGMITMSG SSCGVGLGSG 120 DGRRGSISCQ DCGNQAKKEC VHMRCRTCCM SRGFDCQTHV KSTWVPAAKR RERQQQMKRL 180 RQDPKAAASA SNSSLACTSL TRLAPSPSTL GEGGRWATVG DELPREVRSC AVFKCVRVSP 240 IEQQGEEGLE QQLAYQTSVN IGGHLFRGIL YDQGPQNHHY HHHSDCINLV SNTQQHASFG 300 ADPTAATNLY QAPNATFPGA SVVCTHFCP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19790.1 | 2e-47 | SRS family protein |