PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0154.6.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SBP

Protein Properties

Length: 309aa MW: 33864.2 Da PI: 8.4167

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0154.6.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.7	4.4e-40	25	101	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC a+ls++++yhrrhkvCe+hsk++ v++ g+eqrfCqqCsrfh+l efD++krsCr+rL++hn+rrrk+q+ Kaladp0040s0154.6.p 25 CLVDGCVANLSKCRDYHRRHKVCEAHSKTSRVTIGGQEQRFCQQCSRFHSLGEFDDSKRSCRKRLDGHNRRRRKPQP 101 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MDSSSSSGSY KRARAKSNTV QVPSCLVDGC VANLSKCRDY HRRHKVCEAH SKTSRVTIGG 60 QEQRFCQQCS RFHSLGEFDD SKRSCRKRLD GHNRRRRKPQ PDSLYLSSSK YISTHQGSKF 120 VSYGTQYFPN SAVAASSWND AAKAENNHPY PSNSQLNFGA NNFPSCFSQG YSGEKQFPFL 180 QSADQSVHVS QPHLSITLED VASSNSGHKL LSSDGFDRVI DSDRASSLLS SSHPETSRFT 240 PTQLVLCPTQ PSIPTHLYNG VATESASAMD SPLLADSRSN NGNSSMDFPE IIQNGSDVCH 300 QTISFSWG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	99	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-49	SBP family protein