PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0101.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 706aa MW: 76944.2 Da PI: 5.9704

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0101.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.1	5e-30	303	360	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsY +Ct+ +C vkkkvers+ ++ v+ei+Y+g Hnh+k Kaladp0040s0101.1.p 303 EDGYNWRKYGQKHVKGSEYPRSYLKCTHMNCLVKKKVERSH-EGIVTEIIYKGAHNHPK 360 7**************************************.9************85 PP
2	WRKY	103.8	9.4e-33	498	556	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ Kaladp0040s0101.1.p 498 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKSVITTYEGKHNHD 556 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MDEHAAAMMG DWVPPSPSPK AFFSSLLGGD EQISSGSIPH ISDEARNGSS SFGSHHSSMG 60 LEDNNANQRD ISFDTDMLYS MLPSHKPSSR VGGLGDRIAA RAGFNAPRLN TEIIRMPDAG 120 EVKSPYLTIP SGISPTTLLE SPIFLSNSLT QASPTTGKFP LIAFEDNRSS MLAGKSKEDL 180 FVDGSAFAFK PHAEPSFSFL PGTTNIMSQA MNPQSFPKEV SAMSENIFQN SEQSQVNSHM 240 CLSQSPTEKD LGERTAGSEI RGLDTISFTA EHSPPLDDQH DDEGDQRVSS DSYADGSAGS 300 LEEDGYNWRK YGQKHVKGSE YPRSYLKCTH MNCLVKKKVE RSHEGIVTEI IYKGAHNHPK 360 PAANRRSSMT PNLFDDTHDQ VGLENGAERD SVWSAARNGF EHNSEPGNPL SSLQMQHGAM 420 LESVNAVDPS TTLSNDEEED DRGTHGSVSV ANDVVEEDES ESKRRKIETY VAEIGGGATR 480 AIREPRVVVQ TTSDVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTSAGCS VRKHVERASH 540 DLKSVITTYE GKHNHDVPAA RNSSRVNSAA AMGSQSQSII PRNEPSQVTN MARYERPPHL 600 SSFNLPMMQS LGPPPHGFPM GVNQSSLANM LIAGLGPGQN KFQGMPAHPY PMLQQQQQPQ 660 RDVNGMGFMM PKGEAQVEPN LDPNAYPSNG SSVYHQIINR LPLGP*

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MDEHAAAMMG DWVPPSPSPK AFFSSLLGGD EQISSGSIPH ISDEARNGSS SFGSHHSSMG  60
LEDNNANQRD ISFDTDMLYS MLPSHKPSSR VGGLGDRIAA RAGFNAPRLN TEIIRMPDAG  120
EVKSPYLTIP SGISPTTLLE SPIFLSNSLT QASPTTGKFP LIAFEDNRSS MLAGKSKEDL  180
FVDGSAFAFK PHAEPSFSFL PGTTNIMSQA MNPQSFPKEV SAMSENIFQN SEQSQVNSHM  240
CLSQSPTEKD LGERTAGSEI RGLDTISFTA EHSPPLDDQH DDEGDQRVSS DSYADGSAGS  300
LEEDGYNWRK YGQKHVKGSE YPRSYLKCTH MNCLVKKKVE RSHEGIVTEI IYKGAHNHPK  360
PAANRRSSMT PNLFDDTHDQ VGLENGAERD SVWSAARNGF EHNSEPGNPL SSLQMQHGAM  420
LESVNAVDPS TTLSNDEEED DRGTHGSVSV ANDVVEEDES ESKRRKIETY VAEIGGGATR  480
AIREPRVVVQ TTSDVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTSAGCS VRKHVERASH  540
DLKSVITTYE GKHNHDVPAA RNSSRVNSAA AMGSQSQSII PRNEPSQVTN MARYERPPHL  600
SSFNLPMMQS LGPPPHGFPM GVNQSSLANM LIAGLGPGQN KFQGMPAHPY PMLQQQQQPQ  660
RDVNGMGFMM PKGEAQVEPN LDPNAYPSNG SSVYHQIINR LPLGP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-151	WRKY family protein