PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0039s0452.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 958aa MW: 105621 Da PI: 5.4845

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0039s0452.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.2	8e-29	605	655	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Kaladp0039s0452.1.p 605 EKSVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 655 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 958 aa Download sequence
MEPSRFKDKG VEYFPSLRLS NENVNDGIQS VVMDDVFSGM CEITNFDSYT GWGSTPVPDQ 60 IYAPYEFVSS LHPTPASYQP FDALNFSEQN IICITPTNGS AGPSSVVVSP FGSEDKLLSN 120 QTGNGQFQCN LASSDENDYG IEPAPIATRS SCHSSNERYL IEKPLGQSLD EKMLRVLSLF 180 KESSGAGILA QVWVPVKHGD HFILTTSDQP YLLDNMLAGY REVSRGYTFS TREAPGSFPG 240 LPGRVFISKV PEWTSNVIYY NTTEYLRVKH AVDHEVRGSI AFPVFNPSEN SCCAVLELVT 300 VKEKPNFDLE MKTVCEALET VSLKTTAPPR LHSQILQSLS KNQRDALAEI ADVLRTVCHA 360 HRLPLALTWI PCSYTEGLRE EFIRLHVEAN TERRGKQILC IEESACFAND KSMEGFVQAC 420 CENYLEGKQG VAGKALQSNQ PFFLPDVKCY DISEYPLVQH ARKFGLSAAV AIRLRSTFTD 480 VDDYILELFL PVTMTGSYEQ QLLLNSLSST MQKVCKTLRT VSDAELAETG NSKLLRDGIC 540 QEFEHTANPG MSSQLSSSTS DTSSFHKLPT DTSKSCIGKR EFEDCWQEDV NAQGRHFEKK 600 RSTVEKSVSL SVLQQYFSGS LKDAAKSIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR 660 KLQTVLDSVQ GVEGGLKFDP TTGGLVPARS LVQDLDKGQI LHHGLACNFA AQEMVSTAPS 720 IELLAIKLEE NDCGMGGSHL RAVQNISFKN TGQGALHKSS FPSESFSDDA KSSGMDVMAN 780 CSLSKQVPRV ESLESHFLSQ NSSSMIDEGN NEHNQPASSS MTDSSNGSLL NGSSSTSQSH 840 EDTYIRKKVS RGNTGSKITV KATFKEDTIR FKFDPFAGCF QLYEEVATRF KLQVGTFKLK 900 YLDDEDELVV LESELDWQEC LEVIESVSSP SVKFTVLEIP CGMGSSGSSN CFLMRGT*

Sequence ? help Back to Top

Protein Sequence Length: 958 aa Download sequence

MEPSRFKDKG VEYFPSLRLS NENVNDGIQS VVMDDVFSGM CEITNFDSYT GWGSTPVPDQ  60
IYAPYEFVSS LHPTPASYQP FDALNFSEQN IICITPTNGS AGPSSVVVSP FGSEDKLLSN  120
QTGNGQFQCN LASSDENDYG IEPAPIATRS SCHSSNERYL IEKPLGQSLD EKMLRVLSLF  180
KESSGAGILA QVWVPVKHGD HFILTTSDQP YLLDNMLAGY REVSRGYTFS TREAPGSFPG  240
LPGRVFISKV PEWTSNVIYY NTTEYLRVKH AVDHEVRGSI AFPVFNPSEN SCCAVLELVT  300
VKEKPNFDLE MKTVCEALET VSLKTTAPPR LHSQILQSLS KNQRDALAEI ADVLRTVCHA  360
HRLPLALTWI PCSYTEGLRE EFIRLHVEAN TERRGKQILC IEESACFAND KSMEGFVQAC  420
CENYLEGKQG VAGKALQSNQ PFFLPDVKCY DISEYPLVQH ARKFGLSAAV AIRLRSTFTD  480
VDDYILELFL PVTMTGSYEQ QLLLNSLSST MQKVCKTLRT VSDAELAETG NSKLLRDGIC  540
QEFEHTANPG MSSQLSSSTS DTSSFHKLPT DTSKSCIGKR EFEDCWQEDV NAQGRHFEKK  600
RSTVEKSVSL SVLQQYFSGS LKDAAKSIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR  660
KLQTVLDSVQ GVEGGLKFDP TTGGLVPARS LVQDLDKGQI LHHGLACNFA AQEMVSTAPS  720
IELLAIKLEE NDCGMGGSHL RAVQNISFKN TGQGALHKSS FPSESFSDDA KSSGMDVMAN  780
CSLSKQVPRV ESLESHFLSQ NSSSMIDEGN NEHNQPASSS MTDSSNGSLL NGSSSTSQSH  840
EDTYIRKKVS RGNTGSKITV KATFKEDTIR FKFDPFAGCF QLYEEVATRF KLQVGTFKLK  900
YLDDEDELVV LESELDWQEC LEVIESVSSP SVKFTVLEIP CGMGSSGSSN CFLMRGT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein