PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0038s0059.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GeBP

Protein Properties

Length: 445aa MW: 49903.7 Da PI: 4.3534

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0038s0059.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	113.3	1.5e-35	134	233	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 klfqrlw++eDei lLqG++d +++g+s+ + d+ fy+++k++++++++k+qlveK+rrLKkK+++ ++++sgke++f+++hdq + Kaladp0038s0059.1.p 134 KLFQRLWTDEDEIGLLQGFLDHSTQRGSSQNNphDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLSRVSSGKEIQFKSPHDQAT 223 579**********************9555446**************************************************** PP DUF573 89 felskkiWgs 98 fe++ kiWg+ Kaladp0038s0059.1.p 224 FEIACKIWGT 233 ******95 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MSSDEDQQAP IAGHNEEDDE PDEIDDDEET DEEEEEEDDG EGELERNNNV MEEEEEDVDV 60 EEVDRTISLS SLNSDPTRSV TIAVPAPDIP VAEAAAEIAS ESTAKRLRIL EDEPIGELQR 120 VNPNPPPSDD QARKLFQRLW TDEDEIGLLQ GFLDHSTQRG SSQNNPHDTA LFYDQIKSKL 180 QLDFNKNQLV EKLRRLKKKY RNVLSRVSSG KEIQFKSPHD QATFEIACKI WGTAQNSQCS 240 KDHIQQPQQQ MRVADVDDDM PPNFNPASAT NLNLNFVSNS NNFNSSGGYS NYHHSDRAGV 300 DEWKSQQQQQ KAKKRIRVKM EDIRSSTEHK AAVATNSSPS QIPIWGPPGT NLTAPSLVEE 360 IVKNRISPLM YDIKGNRGYG GLGDGIVRPV PLSFASPVNA IGTDATDDRW RKQQILELEV 420 YSKRLELVQE QIKLTLEQLR STGS*

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MSSDEDQQAP IAGHNEEDDE PDEIDDDEET DEEEEEEDDG EGELERNNNV MEEEEEDVDV  60
EEVDRTISLS SLNSDPTRSV TIAVPAPDIP VAEAAAEIAS ESTAKRLRIL EDEPIGELQR  120
VNPNPPPSDD QARKLFQRLW TDEDEIGLLQ GFLDHSTQRG SSQNNPHDTA LFYDQIKSKL  180
QLDFNKNQLV EKLRRLKKKY RNVLSRVSSG KEIQFKSPHD QATFEIACKI WGTAQNSQCS  240
KDHIQQPQQQ MRVADVDDDM PPNFNPASAT NLNLNFVSNS NNFNSSGGYS NYHHSDRAGV  300
DEWKSQQQQQ KAKKRIRVKM EDIRSSTEHK AAVATNSSPS QIPIWGPPGT NLTAPSLVEE  360
IVKNRISPLM YDIKGNRGYG GLGDGIVRPV PLSFASPVNA IGTDATDDRW RKQQILELEV  420
YSKRLELVQE QIKLTLEQLR STGS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	4e-49	GeBP family protein