PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0013.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family E2F/DP
Protein Properties Length: 346aa    MW: 38394.1 Da    PI: 7.238
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0013.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.68.8e-2892173271
              E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse...............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                          ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e               d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  Kaladp0037s0013.1.p  92 NGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpaiglgpdqqqyDEKNIRRRVYDALNVLMAMDIISK-HKKEIQWKG 173
                          789********...*****999******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MVAGHENGDR NPATGSRGGG VTRSWGTTVS GGQSVSTSGS VGSPTRSEQA ATTPVSESTF  60
VRLNHLDIHA DDAEARGKKK KRGQRAVGGD KNGRGLRQFS MKVCEKVESK GRTTYNEVAD  120
ELVAEFADPA IGLGPDQQQY DEKNIRRRVY DALNVLMAMD IISKHKKEIQ WKGLPRTTLN  180
DVEELKVERM ALRNKIEKKA AYLQELEEQY VGLQNLMQRN EQLFSSENTP SQGVQLPFIL  240
VQTRPHATVE VEISEDMQLV LFDFNSTPFE LHDDNYVLKA MNFCQRSQID AENNFPVDVG  300
EGCCITNIYQ PKIPQQQPHR SSNPGRPPTS PPLPGIIKAR VKPEH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-121E2F/DP family protein