PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0033s0321.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 448aa MW: 49224.8 Da PI: 6.5133

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0033s0321.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.2	1.7e-28	47	103	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg++f rsYYrCt+++C+vkk+vers+ +++++++ g+H+h+ Kaladp0033s0321.2.p 47 ADGYSWRKYGQKHVKGNKFVRSYYRCTHPDCQVKKQVERSH-NGQITDTLVFGDHDHP 103 6**************************************.*************8 PP
2	WRKY	105.1	3.6e-33	221	279	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYYrC++agCpvkk+ver+++d kvv++tYeg+H+h+ Kaladp0033s0321.2.p 221 VNDGYRWRKYGQKFVKGNPNPRSYYRCSTAGCPVKKHVERASHDAKVVITTYEGQHDHD 279 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MVATEESMRD ELVSKLEKPN SPESGILVLR SDQEGGVPLV TPEKGPADGY SWRKYGQKHV 60 KGNKFVRSYY RCTHPDCQVK KQVERSHNGQ ITDTLVFGDH DHPRTQLRLP VTVNSTMIAK 120 EGVFDMPCPV LSEEKTPVAV HQAPKPTDHK ETPMPPTVAE PDSQEHVVAQ STKTKDKLGK 180 DCTPDLKRQK KEPLHPEAAI TDKPTMDPRL VLQTVSEVDM VNDGYRWRKY GQKFVKGNPN 240 PRSYYRCSTA GCPVKKHVER ASHDAKVVIT TYEGQHDHDM PPARMMSNST SGNSTNQFLS 300 LEYNSGVRSN ESHDKCKPKD QLNRDPKIES EEAEKVGNQL GSLSSSGPES KMSDQVSGKS 360 ADNLEAVESC GVTDVAVSTN PAEGLSTDGQ EITKARASPG LAADGLKAEE DSELRNDEAI 420 KQETSEGVRR NLDHGSPTAA TLRDPHL*

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MVATEESMRD ELVSKLEKPN SPESGILVLR SDQEGGVPLV TPEKGPADGY SWRKYGQKHV  60
KGNKFVRSYY RCTHPDCQVK KQVERSHNGQ ITDTLVFGDH DHPRTQLRLP VTVNSTMIAK  120
EGVFDMPCPV LSEEKTPVAV HQAPKPTDHK ETPMPPTVAE PDSQEHVVAQ STKTKDKLGK  180
DCTPDLKRQK KEPLHPEAAI TDKPTMDPRL VLQTVSEVDM VNDGYRWRKY GQKFVKGNPN  240
PRSYYRCSTA GCPVKKHVER ASHDAKVVIT TYEGQHDHDM PPARMMSNST SGNSTNQFLS  300
LEYNSGVRSN ESHDKCKPKD QLNRDPKIES EEAEKVGNQL GSLSSSGPES KMSDQVSGKS  360
ADNLEAVESC GVTDVAVSTN PAEGLSTDGQ EITKARASPG LAADGLKAEE DSELRNDEAI  420
KQETSEGVRR NLDHGSPTAA TLRDPHL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G04880.2	1e-78	WRKY family protein