PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0028.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 292aa    MW: 33728 Da    PI: 9.4801
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0028.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.35.4e-16103148148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T  E+ + +++++++G++ W++Iar+++ gRt++++k++w++++
  Kaladp0033s0028.1.p 103 RGKMTSTEERIVLELHARWGNR-WSRIARRLP-GRTDNEIKNYWRTHM 148
                          89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MNQRLHASFF WVWKTGDINN WEEQSKDRRG SQYDATRYQK GSMDRTRRLS AGKCCRLIWR  60
PPMGFCSKSF RFEGGGRQVL GLNRTGKSCR LRWLNYLHPG LKRGKMTSTE ERIVLELHAR  120
WGNRWSRIAR RLPGRTDNEI KNYWRTHMRK KAQERKRVNY LSITSSESYS SSSNHTQDSL  180
SCSGKESFYD TGGLAAIAVT GKKQKEEEGE RIKMDEIWND IDISKDTITP LNDSYNQGLC  240
TYSCAPLVSP IWEYCPDPLW RMDEDDSKMP PPSNDYFQTC CEAGTSTLKG P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.24e-73MYB_related family protein