PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0032s0059.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 355aa MW: 39174.4 Da PI: 9.0301

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0032s0059.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.7	1e-11	137	181	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++ ++ + k+lG g+W+ I++ + +R + q+ s+ qky Kaladp0032s0059.2.p 137 PWTEEEHQTFLIGLKKLGRGDWRGISKNFVHTRNPTQVASHAQKY 181 8***************************9***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MTGGARRCSH CGNNGHNSRT CNEGKGCLKL FGVKILAEDK VDNHIHDESV VKTYRKEAIK 60 RSNSVGHLAY HHYNNQLALM PIKNCDVAHI GDGDIVNLEH EPENDPHHGD DGYLSDGLTQ 120 YSYCKPKVVR RRKKGVPWTE EEHQTFLIGL KKLGRGDWRG ISKNFVHTRN PTQVASHAQK 180 YFMRQMSAKD STKKKKRRLS LFDLPLKEDL CSIPSASPLL KDSSPLQHGE TCFLNGSNDS 240 LDQGELPFPA HQYSQLLPPL SPGPGPGPAL TGRPYNGWKR SHIPRLENHA DDQANVMTKL 300 NVLALVSPRQ VNATTLQLGL PSFASSNKAG GLMSSMVDDM LELRIALPVG TPSE*

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MTGGARRCSH CGNNGHNSRT CNEGKGCLKL FGVKILAEDK VDNHIHDESV VKTYRKEAIK  60
RSNSVGHLAY HHYNNQLALM PIKNCDVAHI GDGDIVNLEH EPENDPHHGD DGYLSDGLTQ  120
YSYCKPKVVR RRKKGVPWTE EEHQTFLIGL KKLGRGDWRG ISKNFVHTRN PTQVASHAQK  180
YFMRQMSAKD STKKKKRRLS LFDLPLKEDL CSIPSASPLL KDSSPLQHGE TCFLNGSNDS  240
LDQGELPFPA HQYSQLLPPL SPGPGPGPAL TGRPYNGWKR SHIPRLENHA DDQANVMTKL  300
NVLALVSPRQ VNATTLQLGL PSFASSNKAG GLMSSMVDDM LELRIALPVG TPSE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	133	KVVRRRK
2	193	198	KKKKRR
3	194	199	KKKKRR
4	194	199	KKKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61620.1	2e-39	MYB_related family protein