PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0029s0050.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 350aa MW: 39187.7 Da PI: 4.4905

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0029s0050.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.7e-09	280	327	6	53
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +++k q+++Le+++++++ p+ +++ + + ++L+ ++V WF +R Kaladp0029s0050.1.p 280 RLKKVQVDTLERVYRRTKRPTNTMISSIVHVTNLPRKKVVKWFEDKRS 327 67899***************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MASVSSVNVS ASFRSASTVS SYCSRLGVHA KVSSQNQRLQ TSASSARSIA AFARRRKSYS 60 VINSSSSSNN KKNVSKDVVQ EEDVDEDAFE ALFAQLEEDL KNDPSIEDED GELTEEELAK 120 LESELEEAMM EDDDFFKMLN ATAGGTENDG DGDEDEEGEE DEEEEEDVEE DKSVKLKNWQ 180 LRRLARALKV GRRKTSIKSL AAELCLERPL VLEMLGNPPP KLLMMSAMLP DESVQPAMTE 240 SLATPVEVVE TVPEEKIVVL DTDKKVPIHA MQSQWSSQKR LKKVQVDTLE RVYRRTKRPT 300 NTMISSIVHV TNLPRKKVVK WFEDKRSEDG VPTERLPYER STTETVFSS*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MASVSSVNVS ASFRSASTVS SYCSRLGVHA KVSSQNQRLQ TSASSARSIA AFARRRKSYS  60
VINSSSSSNN KKNVSKDVVQ EEDVDEDAFE ALFAQLEEDL KNDPSIEDED GELTEEELAK  120
LESELEEAMM EDDDFFKMLN ATAGGTENDG DGDEDEEGEE DEEEEEDVEE DKSVKLKNWQ  180
LRRLARALKV GRRKTSIKSL AAELCLERPL VLEMLGNPPP KLLMMSAMLP DESVQPAMTE  240
SLATPVEVVE TVPEEKIVVL DTDKKVPIHA MQSQWSSQKR LKKVQVDTLE RVYRRTKRPT  300
NTMISSIVHV TNLPRKKVVK WFEDKRSEDG VPTERLPYER STTETVFSS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	320	KRLKKVQVDTLERVYRRTKRPTNTMISSIVHVTNLPRKKVVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	1e-62	HB-other family protein