PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0417.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WRKY

Protein Properties

Length: 423aa MW: 46920.2 Da PI: 8.0577

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0417.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.3	6.8e-33	96	154	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ldDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers +++++ei+Y+g+Hnh+k Kaladp0024s0417.2.p 96 LDDGYNWRKYGQKSVKGSENPRSYYKCTFTNCPTKKKVERSL-EGHITEIVYKGSHNHPK 154 59**************************************.*************85 PP
2	WRKY	105.6	2.6e-33	251	309	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d k v++tYeg+Hnh+ Kaladp0024s0417.2.p 251 LDDGYRWRKYGQKVVKGNPNPRSYYKCTFFGCPVRKHVERASQDLKSVITTYEGKHNHD 309 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MKAEQDENNY SNFSFQPQTT SSIYDQQTSA AFMDDTMSKQ LEWSFNTHPK QTDLSSNVIQ 60 TAAQAESRPM QTNSNMQNGT AVASSRTNIG GKQRRLDDGY NWRKYGQKSV KGSENPRSYY 120 KCTFTNCPTK KKVERSLEGH ITEIVYKGSH NHPKPQSTRR SSSSSLYGCC ESENGRTESG 180 GTPENSSTSM GEDEFEHGSP LSKSGDDNDV NEPDSKRWKG ENEIESAAGS GSRTVREPRI 240 VVQTTSEIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTFF GCPVRKHVER ASQDLKSVIT 300 TYEGKHNHDV PAARGSHSYS MIKPSSSANA PLAIRPTAAT VSSANHTSNY SNSLQASRPS 360 LQTTTSQAPF TLEMMQDPGS FGFSGFGKPS CNYGSQPQTD SFFSRAKEEP KDDQFFFDQF 420 LS*

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MKAEQDENNY SNFSFQPQTT SSIYDQQTSA AFMDDTMSKQ LEWSFNTHPK QTDLSSNVIQ  60
TAAQAESRPM QTNSNMQNGT AVASSRTNIG GKQRRLDDGY NWRKYGQKSV KGSENPRSYY  120
KCTFTNCPTK KKVERSLEGH ITEIVYKGSH NHPKPQSTRR SSSSSLYGCC ESENGRTESG  180
GTPENSSTSM GEDEFEHGSP LSKSGDDNDV NEPDSKRWKG ENEIESAAGS GSRTVREPRI  240
VVQTTSEIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTFF GCPVRKHVER ASQDLKSVIT  300
TYEGKHNHDV PAARGSHSYS MIKPSSSANA PLAIRPTAAT VSSANHTSNY SNSLQASRPS  360
LQTTTSQAPF TLEMMQDPGS FGFSGFGKPS CNYGSQPQTD SFFSRAKEEP KDDQFFFDQF  420
LS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-118	WRKY family protein