PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0168.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 298aa    MW: 32954.4 Da    PI: 7.017
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0168.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.3e-115599147
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         r +WT  E++++++a +++  + Wk+I + +   +t  q++s+ qky
  Kaladp0022s0168.2.p 55 RESWTDIEHDKFLEALHLFDRD-WKKIEAFVS-SKTVIQIRSHAQKY 99
                         789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MVSVRTNSSS SKVQSELDPM DASMPGLSNS LQPPMDPEDM MSKKIRKPYV ISKSRESWTD  60
IEHDKFLEAL HLFDRDWKKI EAFVSSKTVI QIRSHAQKYF LKIQKNGMTE HVPPPRPKRK  120
AAHPYPQKAS KIAHMDFQMV GSIQPPAPPP QPGYALPSLS SMPSSSAEFS SWTRSSAPPL  180
DMSHISKDGG AILGATGASN FGCSSSNESS SRTWCTNMSN EPGNSDMPIR VMPDFAQVYN  240
FIGSVFDPNT SDHLQKLKTM DPINVETALL LMRNLAINLT SPEFEDHGDC DMMYSVL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-69MYB_related family protein