PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0020s0113.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 101aa    MW: 11363.9 Da    PI: 9.9772
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0020s0113.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.8e-081357345
                         SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                         +WT+   + +  a + + ++   +W  Iart+g g+t  ++k ++q
  Kaladp0020s0113.1.p 13 SWTATQNKAFESALAVYDKEtpdRWYNIARTVG-GKTVDEVKMHYQ 57
                         7*****************99*************.***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MASSSMSRSS SSSWTATQNK AFESALAVYD KETPDRWYNI ARTVGGKTVD EVKMHYQILL  60
EDVKFIEAGK VPFPKYVTTG TKSHAFMGEH EQRMKNLKLR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.13e-36MYB_related family protein