PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0019s0045.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 323aa    MW: 35294.7 Da    PI: 8.6416
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0019s0045.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.56.5e-1358102147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          r +WT  E++ +v+a +++  + Wk+I + +g  +t  q++s+ qky
  Kaladp0019s0045.1.p  58 RESWTDMEHDMFVEALHLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 102
                          789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MVSVHPNSAK AQSGSAYFHP MDASLPGLNN SLQPQPPPMD PDDSSKKIRK PYVISKSRES  60
WTDMEHDMFV EALHLFDRDW KKIEAFVGSK TVIQIRSHAQ KYFLKVQKNG MTEHVPPPRP  120
KRKAAHPYPQ KASKIAHADS QFAGSVQPTT PKVHPGYALP GLNSISSSST EFSSWTHSSA  180
PPLDMSHISK NGGAMLGATG AGNFGCSSSN ESSSRTWCAN VSNEQGNSST PIRFMPDFAQ  240
VYNFIGSVFD PDTSGHLQKL KTMDPINVET ALLLMRNLAI NLTSPEFEDH RQLLESYDVL  300
PGKGKAFDNI YPGIHQSAIS TS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-74MYB_related family protein