PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0316.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 309aa    MW: 33595.2 Da    PI: 9.618
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0316.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-11555146
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                         +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
  Kaladp0016s0316.2.p  5 KQKWTAEEESALKAGVVKHGAGKWRTILKDPEfssvlYLRSNVDLKDKWRN 55
                         79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MGAPKQKWTA EEESALKAGV VKHGAGKWRT ILKDPEFSSV LYLRSNVDLK DKWRNMSVMA  60
NGWGSREKAR LALKRMQSAP KPGENQMLLT YGPHSEDESV DLKPLPSPSG AQQASGSKRT  120
FTRLDNLIME AINELKEPGG SNKTSIGNYI EEQYCAPPNF KRLLSAKLKL LVSSGKLVKV  180
KRKYRIRTSQ VSPESKNSPH PSSNLLEGRS SLPSKIDYDN FNLSDIKTTS RAEIDLELAK  240
MRNMTAEEAA IAAARAVAEA EAAIAEAEEA AREAEAAEAD AEAAMAFAEA ARKTLKGRSD  300
IKTVGACC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.15e-77MYB_related family protein