PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0012s0018.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 354aa    MW: 39332.8 Da    PI: 10.0624
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0012s0018.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.3e-31284341359
                          -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  Kaladp0012s0018.1.p 284 DDFSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 341
                          99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MIDFSGQSGE EVCWLAMDEA EEANKAAVES CHRLLGLLSQ PQSHVNGRNL MAETELTVRS  60
FKKVVSMLDR KLGHARFRKS KNLPSPPLFP QNVLLEGQAY RQENNLNPIN ASQSRMFDLI  120
EKKSLPESGL GLKNTTGFGN VAMEMSSSGK SPAQVTVQTA SGYQILQQQQ MKQQAEMMMM  180
YQKRSSGISL NFDSTSCTPT MSSTRSFLSS LSMDGSSFQL IGASRSMDQN SHPHRRKCSS  240
RGEDGSVKCG SSSRCHCSKK RKHRIKRSIK VPAISNKLAD IPPDDFSWRK YGQKPIKGSP  300
HPRGYYKCSS MRGCPARKHV ERCLEEPSML IVTYEGEHNH PRIPPQISQS ANT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.17e-65WRKY family protein