PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0957.5.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 396aa MW: 43886.8 Da PI: 5.6447

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0957.5.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.5	2.1e-06	46	89	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 +C++++ +++ l C + ++ lC++C ++H H++++ Kaladp0011s0957.5.p 46 LVCQRCHAQPAALQCIEERVSLCQSCDWTGHDAstsgaaHKRRN 89 68*****************************5477888888765 PP
2	CCT	58.2	3e-20	338	381	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a+lRYkeK+k RkFeK++rY sRK++A+ R+RvKGrFvk+ Kaladp0011s0957.5.p 338 RSKAVLRYKEKKKMRKFEKTVRYVSRKERADIRKRVKGRFVKAG 381 889**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MGYKCDFCCN RSSVVYCRSD DACLCLDCDT SVHAANSLSR RHSRTLVCQR CHAQPAALQC 60 IEERVSLCQS CDWTGHDAST SGAAHKRRNI KFYSDCPSAA ELQSMWSYDS ESVSVSGSIS 120 IGEHEMGLMS IADGNVKQAK PSTTEVDQLC NVNPDQVWNS SAQDLDSSFS NASHETEIVN 180 TPQPKLSFLE AINPTGDDDL FVDFDMDESE LNLENYEELF RVNFSQSEEL LENGGIDSLF 240 EPRNKSLTEL NCHRTLASQK VASAAQPGCS KALSVDSMMT SKTEPVIHFK QRQSSSTLSF 300 SGDGGGDFID CGTSSMISLG EHPWCPSFQE SPSPSTNRSK AVLRYKEKKK MRKFEKTVRY 360 VSRKERADIR KRVKGRFVKA GETYDYDPLS QTKSC*

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MGYKCDFCCN RSSVVYCRSD DACLCLDCDT SVHAANSLSR RHSRTLVCQR CHAQPAALQC  60
IEERVSLCQS CDWTGHDAST SGAAHKRRNI KFYSDCPSAA ELQSMWSYDS ESVSVSGSIS  120
IGEHEMGLMS IADGNVKQAK PSTTEVDQLC NVNPDQVWNS SAQDLDSSFS NASHETEIVN  180
TPQPKLSFLE AINPTGDDDL FVDFDMDESE LNLENYEELF RVNFSQSEEL LENGGIDSLF  240
EPRNKSLTEL NCHRTLASQK VASAAQPGCS KALSVDSMMT SKTEPVIHFK QRQSSSTLSF  300
SGDGGGDFID CGTSSMISLG EHPWCPSFQE SPSPSTNRSK AVLRYKEKKK MRKFEKTVRY  360
VSRKERADIR KRVKGRFVKA GETYDYDPLS QTKSC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-81	CO-like family protein