PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0010s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 374aa    MW: 40407.1 Da    PI: 6.8461
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0010s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.92.4e-34202259259
                          --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
  Kaladp0010s0001.1.p 202 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIVITTYEGQHNHP 259
                          8********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MSDHQPTDFF NFHDPFVTYQ YSNLLGQAGA TTAPTSAASS SLYDNSSYNS GITTGMSFSE  60
SLDGSVDYNT LARAFGLSSS SSEELFSSVV NEGLGYGKAQ GDQMLQGDGN NGQIGAIGGS  120
SGGGEVVLAS PGPNSSISSS SGEASGREED CSKEHKVAKG SHEDEDGDSS KKQSKQSNKK  180
GEKRQREPRF AFMTKSEVDH LEDGYRWRKY GQKAVKNSPY PRSYYRCTTQ KCNVKKRVER  240
SFQDPSIVIT TYEGQHNHPI PTTLRGSYNT PSLMFSPPSS LSPAAFNLAG GAQGSGFINP  300
HDLLLRMPHW HNNNLIHGMG YNNGGIPPSS TPTSLHQRLQ QRSQQPQVQA DYGLLQDLVN  360
PSGSFGDHKQ EQP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.17e-53WRKY family protein