PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0912.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 285aa    MW: 30952.8 Da    PI: 7.1348
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0912.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.00099173195123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C +Cg  F +   L  H+r+H
  Kaladp0008s0912.1.p 173 HECAICGAEFASGQALGGHMRRH 195
                          78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDHQQGNNSI LKRKRSKLQR PFVGGMADGR PNVVVTPTTT FSSLSSEDQM PLATEEEEEE  60
DREVAKCLIL LAQAHNPPRI GSLEMMSSRK WWSLEDKKQV NRGGGVYECK TCNRSFHSFQ  120
ALGGHRTSHK KPRITTHDET PLVSKSPHMG VNVPVPTIAA LQLGSRAAKT RVHECAICGA  180
EFASGQALGG HMRRHRVTNS PQETSTTETK AAAADGVRIT LSLLAPPAPE EASSRSDHNE  240
LLSLDLNLPA ASSSEEDETR SFLPEKLQDS GLGLSTPALV DCHY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11118LKRKRSKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.16e-40C2H2 family protein