PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0902.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 350aa    MW: 37854.4 Da    PI: 6.1376
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0902.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012102124123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C+ C k+Fs++  L  H++ H
  Kaladp0008s0902.1.p 102 FTCTFCLKTFSTSQALGGHQNAH 124
                          89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MEQPPPPPPP FFPPNPPPEI VNVDDQDDPL ELGLGLPNVS QGNNNNNHDN NAQNVPSNIV  60
QPAAVIVGHN NEEVLRLGGN RDSTAGIGGG RQIPSPRSDK VFTCTFCLKT FSTSQALGGH  120
QNAHKEERQA ARNLLADVQR DDAQAADMGR HQPLLESYGQ GLMSQHVAPN YNNPFQTPAY  180
GDVIQRPSNP SMTLPQPTPL LTGHGQHHPW QASGGSRGLG GFGSGSSMSS TPERPPPHYP  240
IYRGYDSSHF TMGFNTNIYN PFPRVPSWQS RATEQRLAYQ FRPSYSQHQQ GRPVGGHDNM  300
GLLGTGLSGR IRNHEAGQGS GNNQREEGGN EQPADDNAPD EELDLTLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G27880.11e-11C2H2 family protein