PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0516.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 317aa    MW: 35056.5 Da    PI: 6.9782
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0516.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-08261302443
                          S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS
      Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 
                          W++ Ed+ l++a k ++++   +W++I++ ++ gR+ k c  r
  Kaladp0008s0516.1.p 261 WSPGEDKALLNALKAFPKDttmRWEKISAAVP-GRSKKACMKR 302
                          ********************************.*******887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEFLDEESRP RFLFQSRAHP SSSSESATSE SRKINKLLIW VTTSIAILLV VLTFLFAANH  60
EPLTSILLWV AVSILIGPFA PGSVTGGDVR VGNGSVVEEP EPDPVETEVR KPKQHRGGSW  120
RQNEEQSRRS DAVVKVEKED SASEAEKIDS FAEEGSGSAA AVEEREWTEE DFELLKKQMV  180
KNPVGKTRRW EVIAEAFQGR HKVESVVKMA KSMAERRMGN GDSYTQFLKN RKPLDSRAVE  240
SDNGGMVAEE SKKEDGSNTG WSPGEDKALL NALKAFPKDT TMRWEKISAA VPGRSKKACM  300
KRVADLARDF RSSKAS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.11e-58MYB_related family protein