PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0125.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 130aa    MW: 14488.6 Da    PI: 10.2971
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0125.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.72.3e-065476123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C++C+k F r  nL+ H r H
  Kaladp0008s0125.1.p 54 FVCEICNKGFQRDQNLQLHRRGH 76
                         89*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MPGDATAASA EEACVFSSGT QAAVKRKRSL PGVPDPDAEV VALSPKTLMA TNRFVCEICN  60
KGFQRDQNLQ LHRRGHNLPW KLRQRISKEV RKKVYVRPDT SCVHHDRTRA LGDLTGIKKH  120
FSRPEEVEI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18193KLRQRISKEVRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66730.12e-62C2H2 family protein