PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0003s0134.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 311aa    MW: 34595.5 Da    PI: 4.6412
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0003s0134.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.8e-162166148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+ +++E++l++++++ lG++ W++Ia+ ++ gRt++++k+rw+++l
  Kaladp0003s0134.3.p 21 RGNISPQEEDLIIKLHAALGNR-WSLIASQLP-GRTDNEIKNRWNSHL 66
                         7899******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MRCGKSCRLR WINYLRKDLK RGNISPQEED LIIKLHAALG NRWSLIASQL PGRTDNEIKN  60
RWNSHLSRSI TSWRRPVNDT LPQQILDNLA KLMAKPNPST KKKGSKKNGP ANKETRDKPV  120
TLEDDNNDKP QTPDVHKESL PTNSCSQQSL QSILSLEDRY EAEEGEMDMD LGPVDDYGGV  180
LSLSDMVTPS DPSTMMHQPL SPNEILSPGA LYPEFMNELA GLSTGHAEMG STSSWLPNCS  240
TSTMDNTTQP SLSSPSSPFT IDHLLNISSD WNWEDCVQTP NDQDLIMNHE VGSFDNLSWL  300
WDDGGEFGAV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.15e-37MYB family protein