PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG93040.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 573aa MW: 61776.8 Da PI: 6.4627

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG93040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.7	2.9e-08	243	279	26	62
trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkryk 62 ++ + e++s+ mr+ g++r+p+ C++kw +++ + GBG93040.1 243 TRGRRYEWISDGMRDAGYNRTPEDCRKKWTKMKDTMN 279 678899*************************987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MGGYEGAISI EDARLEHTRG VVGVGGPGFP GWSQDCGRKS PTERGVGQRV DATHPWTFGG 60 MDMPGTGGGQ QGFYGVESDP AGGNLQGVVP RGSVGDGYGE DAVHHTSRVD ASLPQFDINS 120 KGCGAWGGGQ PQRRSLGVQH TPYIAHQPRL SMADRQHGHP ADNFNRQMSH LRRGQQTPCT 180 PGSAPTGGRV DDLSPARRMA SASGHSGMWD GMPSPMGSSI GGGSRQMTGD VGPYDTGRGT 240 HMTRGRRYEW ISDGMRDAGY NRTPEDCRKK WTKMKDTMNL ISKKCDRSGQ AGYYNMIADE 300 RREKGVPLTF ERSLWDAMEW WRVKASFKCN HTLASEEMDV PESGGVNEEA GGPDRAGEAA 360 SEGGGTDALD YSAKTRRTSA GRVRGDGSPA TAGMRVIMEE STRAIVDGLD KASGTLARAT 420 TEGASMLSSR VGDIAQQIGV VAGAMQEGNV VMASLKAVMA SRNQDAFREE ITRRTTRVYS 480 VDVNGLPGVN LDVALGYAGD LLSYVLIWVT KLADDIPDDW STLQHDIVGD IVLKSVEYLA 540 VEQVERLDMG AFYHTFLDWP LVGRRYLHGE IRL

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MGGYEGAISI EDARLEHTRG VVGVGGPGFP GWSQDCGRKS PTERGVGQRV DATHPWTFGG  60
MDMPGTGGGQ QGFYGVESDP AGGNLQGVVP RGSVGDGYGE DAVHHTSRVD ASLPQFDINS  120
KGCGAWGGGQ PQRRSLGVQH TPYIAHQPRL SMADRQHGHP ADNFNRQMSH LRRGQQTPCT  180
PGSAPTGGRV DDLSPARRMA SASGHSGMWD GMPSPMGSSI GGGSRQMTGD VGPYDTGRGT  240
HMTRGRRYEW ISDGMRDAGY NRTPEDCRKK WTKMKDTMNL ISKKCDRSGQ AGYYNMIADE  300
RREKGVPLTF ERSLWDAMEW WRVKASFKCN HTLASEEMDV PESGGVNEEA GGPDRAGEAA  360
SEGGGTDALD YSAKTRRTSA GRVRGDGSPA TAGMRVIMEE STRAIVDGLD KASGTLARAT  420
TEGASMLSSR VGDIAQQIGV VAGAMQEGNV VMASLKAVMA SRNQDAFREE ITRRTTRVYS  480
VDVNGLPGVN LDVALGYAGD LLSYVLIWVT KLADDIPDDW STLQHDIVGD IVLKSVEYLA  540
VEQVERLDMG AFYHTFLDWP LVGRRYLHGE IRL