PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG92533.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 490aa    MW: 54217.2 Da    PI: 9.8307
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG92533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.81e-11155228268
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                 W+   + aL++a+r        m++++ r k ++ +W++v +++++ g++r  + C++kw+nl +++kk+ +  
  GBG92533.1 155 WSVGDTIALVRAKRdqdlyftGMGSSFARMKTREWKWKDVRARLQSMGVTRDVVDCRKKWDNLMQQFKKVHKFH 228
                 8889999*******888888889999999****************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MSRCRPSAEE SVRVNVEWMR LSPASRSGSG APSGRQRLED LSQEGADVHR DGRQLWAKCR  60
QALHQHGTET ITRGVQRLHV DEGDEAAVEE AQGCDDVDGD DDCNSDDLPD IRPLGRKATK  120
GGAAARKGPA TKSRRSKKMD DDTGRSDGEG GRNFWSVGDT IALVRAKRDQ DLYFTGMGSS  180
FARMKTREWK WKDVRARLQS MGVTRDVVDC RKKWDNLMQQ FKKVHKFHNL SGGKDYFKLA  240
SKDRRSEGFS FVMDRSVYDE MEAMTKGDHT IHLKNLADTG AAGGVQMPAG VGAAGAPWPL  300
RVEGRQPVRS RGRRKTPHSA QGVVTDMGRG RTCGNKPLRP SPTSWASMPQ TVIDGGGKHV  360
YARRRPWEEA GKHPRGQSGA GRGQRHVPKT KRLLSEEASE SMPLRRGRSW TAANEEEDDD  420
VFTMEEEAAE DNVAAPRGST LQRSSDQSGA RRLVTPPSEA QQVRAHNTQK AKEVVVDVGG  480
EDDEPLESRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-08Trihelix family protein