PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91816.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1173aa MW: 124706 Da PI: 8.0823

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.8	3.6e-10	591	667	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi a+r+ +++l r k k +We+v k++ + g+ +r+++ C +kw+nl +++k + + +++ GBG91816.1 591 WTVEHMIALIIAKRDQDSHLAglghnygRMKTKTWKWEDVEKRLVQMGVtSRKAVDCGKKWDNLYQQFKSVHKFMGE 667 ************77777664444333779*********99999899***************99876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1173 aa Download sequence
MMMTTTMRRM RMMERAVGGA KSERRSLLLV SLAMAVVLFG TLVLSAEEDD GGSTAKLLGD 60 PGYGRPGPYP ISRVLKRNFS VPNATTGCRQ GSTDLCPQTV NLFFPTVAKL SRSPDRSHCG 120 DLNRVAGEGV GESAFRGLSL LCDDGEREER EEREDGEGGE VLGEAAAAAA AAAGAGAGAC 180 ADAGAAAAIA AAAATSGFPL AIFSPGFMLS ADLYFGYGEI LASWGYVVVV WEPNTESVLN 240 YLTHRLPLLL LVALLLLIVV VFHICFLGRV PGRKQTRRMP KRSTKMDKLQ TKTTMSVGGG 300 GSSRQRCNSA EGGRRPYDPT LYSHLPSHEI PLPPSDDDVD DPRSSTVPLG SGSTQDWMGS 360 QVYRHASTPT YIGLLEGRTP AGYDAGLVDL SFGLRSGSGE GLPHTVVVNP ASASKHTSPS 420 VRAAGPADSH GFVSPRRVAL STASVAASRT KTAGLAGCRT TTLGGAIDGE GDDDERDATK 480 VVGRQFWDDE RQRLRSTNTV GITRGVVRIS VGAENEFEDC GGGGGEEITA DDGRDDNNED 540 DDGEMEICPV GRKRGGSTTR TKVRESCKGG KGKKCGEESW AGNGTKSRDF WTVEHMIALI 600 IAKRDQDSHL AGLGHNYGRM KTKTWKWEDV EKRLVQMGVT SRKAVDCGKK WDNLYQQFKS 660 VHKFMGESGK PNFFTLTPGE RRERGFDFRM DERVYSEMKA MSGGDHTIHP TNLADTGAPG 720 GVQLSGAVGG RNKSGGSDVG GGGSGRRSRI DEGFVVLRRW RWRGRQSKEC QTEDLRGDGG 780 RHEGARGADV DDGGQREQEA VLNSDEAMRH SGERDSRKAK RNSGSGDAGE TQKGRGHVPK 840 SKRPRYDDDN FEHSGDLHVE EESMVDAQGA NVMKRMGFGR DGVSREQLAA LKQGFVGGVA 900 VSLARNPKAA GIVMTDARVE RQVPPKVGQV AARPPIPALQ AGTSGVDKTS SAQKVDTTAG 960 GGRMAAADNT TGSGVAEAAE EGRVDDVSAC ALLAGAHTGA MRNRALVAIA LIDWAFNQSQ 1020 NVTSSPIYQK IDPSKGVFAA GHSAGGKTSA LAAQFDKAQR ILGVVGVDPV DCSPPFQSCA 1080 PAECNYQKFY TADRVPSWQV LILKSGHMSF CNGTVGLPGL ACKKGTVSVK VAIELSSTVL 1140 VALAEASIRN ADIKQFMKDW CTSQSLQVTC LSK

Sequence ? help Back to Top

Protein Sequence Length: 1173 aa Download sequence

MMMTTTMRRM RMMERAVGGA KSERRSLLLV SLAMAVVLFG TLVLSAEEDD GGSTAKLLGD  60
PGYGRPGPYP ISRVLKRNFS VPNATTGCRQ GSTDLCPQTV NLFFPTVAKL SRSPDRSHCG  120
DLNRVAGEGV GESAFRGLSL LCDDGEREER EEREDGEGGE VLGEAAAAAA AAAGAGAGAC  180
ADAGAAAAIA AAAATSGFPL AIFSPGFMLS ADLYFGYGEI LASWGYVVVV WEPNTESVLN  240
YLTHRLPLLL LVALLLLIVV VFHICFLGRV PGRKQTRRMP KRSTKMDKLQ TKTTMSVGGG  300
GSSRQRCNSA EGGRRPYDPT LYSHLPSHEI PLPPSDDDVD DPRSSTVPLG SGSTQDWMGS  360
QVYRHASTPT YIGLLEGRTP AGYDAGLVDL SFGLRSGSGE GLPHTVVVNP ASASKHTSPS  420
VRAAGPADSH GFVSPRRVAL STASVAASRT KTAGLAGCRT TTLGGAIDGE GDDDERDATK  480
VVGRQFWDDE RQRLRSTNTV GITRGVVRIS VGAENEFEDC GGGGGEEITA DDGRDDNNED  540
DDGEMEICPV GRKRGGSTTR TKVRESCKGG KGKKCGEESW AGNGTKSRDF WTVEHMIALI  600
IAKRDQDSHL AGLGHNYGRM KTKTWKWEDV EKRLVQMGVT SRKAVDCGKK WDNLYQQFKS  660
VHKFMGESGK PNFFTLTPGE RRERGFDFRM DERVYSEMKA MSGGDHTIHP TNLADTGAPG  720
GVQLSGAVGG RNKSGGSDVG GGGSGRRSRI DEGFVVLRRW RWRGRQSKEC QTEDLRGDGG  780
RHEGARGADV DDGGQREQEA VLNSDEAMRH SGERDSRKAK RNSGSGDAGE TQKGRGHVPK  840
SKRPRYDDDN FEHSGDLHVE EESMVDAQGA NVMKRMGFGR DGVSREQLAA LKQGFVGGVA  900
VSLARNPKAA GIVMTDARVE RQVPPKVGQV AARPPIPALQ AGTSGVDKTS SAQKVDTTAG  960
GGRMAAADNT TGSGVAEAAE EGRVDDVSAC ALLAGAHTGA MRNRALVAIA LIDWAFNQSQ  1020
NVTSSPIYQK IDPSKGVFAA GHSAGGKTSA LAAQFDKAQR ILGVVGVDPV DCSPPFQSCA  1080
PAECNYQKFY TADRVPSWQV LILKSGHMSF CNGTVGLPGL ACKKGTVSVK VAIELSSTVL  1140
VALAEASIRN ADIKQFMKDW CTSQSLQVTC LSK