PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG91706.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family LFY
Protein Properties Length: 475aa    MW: 52435.1 Da    PI: 7.8094
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG91706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY21.82.2e-07101162163222
     FLO_LFY 163 sggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkse.ededeeeeededeeg..sge 222
                 s  ++++ ++l+++++kk++++kkk++kkk+k+kkkke+++e e+e+eeeee+e++e+  +g 
  GBG91706.1 101 S-AKRMCVSGLMKKKKKKKKKKKKKQKKKKKKKKKKKEEEEEeEEEEEEEEEEEEGEEegGGG 162
                 2.2334566666666655555555555554444444443333222222222222222211222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MAANAAQCSA HMVQELVSED NVRQRDEVPE LQHVGEFVLA CPRAATLHRG PILIAPIVNM  60
LSLHGTTVIQ GSSSKSSAVA PWIVVTPLKC CTDLAQGGNG SAKRMCVSGL MKKKKKKKKK  120
KKKKQKKKKK KKKKKKEEEE EEEEEEEEEE EEEEGEEEGG GGGGGEEEEE EGGGGGGGGG  180
GGGGGGGGAG GGRGGGRKRR NDLGFDFKRL SLGGDVYALM SFDQFSALDF CFRYEHMRDH  240
QKLLAVLEEC LSDYNSQARS PMQLVLFMYV AKHICRISRI IRQPFGNALL VGVGGTGRQS  300
LTKLATFIAE YTLFQVIISK SYGLKEWKED LKIVLRHAGA ENKPMVFLFS DNQIKDEVFL  360
EDINNILNTG EVPNLYPKDE IASVLEMVRI RAKKVGRDGS SADLMQYFID VCKENLHMVL  420
CMTPEGGNFR RRLRMFPSLV NCCTIDWFSE WPSDGLKSVA SKSLERVSYF PPFAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118KKKKKKK
2112120KKKKKKKKK
3112124KKKKKKKKKKKKK
4112130KKKKKKKKKKKKKQKKKKK
5112132KKKKKKKKKKKKKQKKKKKKK
6112134KKKKKKKKKKKKKQKKKKKKKKK
7112136KKKKKKKKKKKKKQKKKKKKKKKKK
8113119KKKKKKK
9113121KKKKKKKKK
10113125KKKKKKKKKKKKK
11113131KKKKKKKKKKKKKQKKKKK
12113133KKKKKKKKKKKKKQKKKKKKK
13113135KKKKKKKKKKKKKQKKKKKKKKK
14113137KKKKKKKKKKKKKQKKKKKKKKKKK
15114120KKKKKKK
16114122KKKKKKKKK
17114126KKKKKKKKKKKKK
18114132KKKKKKKKKKKKKQKKKKK
19114134KKKKKKKKKKKKKQKKKKKKK
20114136KKKKKKKKKKKKKQKKKKKKKKK
21114138KKKKKKKKKKKKKQKKKKKKKKKKK
22115121KKKKKKK
23115123KKKKKKKKK
24115127KKKKKKKKKKKKK
25115133KKKKKKKKKKKKKQKKKKK
26115135KKKKKKKKKKKKKQKKKKKKK
27115137KKKKKKKKKKKKKQKKKKKKKKK
28115139KKKKKKKKKKKKKQKKKKKKKKKKK
29116122KKKKKKK
30116124KKKKKKKKK
31116128KKKKKKKKKKKKK
32116134KKKKKKKKKKKKKQKKKKK
33116136KKKKKKKKKKKKKQKKKKKKK
34116138KKKKKKKKKKKKKQKKKKKKKKK
35116140KKKKKKKKKKKKKQKKKKKKKKKKK
36117123KKKKKKK
37117129KKKKKKKKKKKKK
38117135KKKKKKKKKKKKKQKKKKK
39117137KKKKKKKKKKKKKQKKKKKKK
40117139KKKKKKKKKKKKKQKKKKKKKKK
41117141KKKKKKKKKKKKKQKKKKKKKKKKK
42118124KKKKKKK
43118130KKKKKKKKKKKKK
44118136KKKKKKKKKKKKKQKKKKK
45118138KKKKKKKKKKKKKQKKKKKKK
46118140KKKKKKKKKKKKKQKKKKKKKKK
47119127KKKKKKKKK
48119131KKKKKKKKKKKKK
49119137KKKKKKKKKKKKKQKKKKK
50119139KKKKKKKKKKKKKQKKKKKKK
51119141KKKKKKKKKKKKKQKKKKKKKKK
52120132KKKKKKKKKKKKK
53120138KKKKKKKKKKKKKQKKKKK
54120140KKKKKKKKKKKKKQKKKKKKK
55120142KKKKKKKKKKKKKQKKKKKKKKK
56121139KKKKKKKKKKKKKQKKKKK
57121141KKKKKKKKKKKKKQKKKKKKK
58121143KKKKKKKKKKKKKQKKKKKKKKK
59122140KKKKKKKKKKKKKQKKKKK
60122144KKKKKKKKKKKKKQKKKKKKKKK
61123131KKKKKKKKK
62126132KKKKKKK
63126134KKKKKKKKK
64126138KKKKKKKKKKKKK
65127133KKKKKKK
66127135KKKKKKKKK
67127139KKKKKKKKKKKKK
68128134KKKKKKK
69128136KKKKKKKKK
70129135KKKKKKK
71130136KKKKKKK