PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91563.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1135aa MW: 122574 Da PI: 6.6865

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.3	2.7e-10	364	438	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e ++L++ +re e +l r + k+ +W +++k+m+ +g + + C +kw+nl + ykki++ ++ GBG91563.1 364 WSTDEQMLLVKCKREQEMHLAglghnydRMRTKEWKWVDIAKRMANGGSPKDADDCMKKWDNLFQNYKKIQRFQN 438 ************77777764444333678************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 1135 aa Download sequence
MADLQRRLPL LLLVVVVFLF VVFLHVCLSC RPWKQHRKRR ASTKRVVLQG ERPMAGMKAC 60 AILPAAEGGR RPATTEPSRR YDPSMYSHLP SWETPLPPSD EESEGDELPT FPLASGSTQL 120 LSQTVLVGGS ASNEQGEYTS LLQQGLGDDD DGGVDLRFGL SSGGAREASR TVITAAHASA 180 GGLQQPRREQ TGPSTVRGGA SVIGGVGSSP TARQHVSSAP SGERLTDNWD VRTAAAAASL 240 RTSGARSSML NRTTPAPPEG RDEGACRPPA GSGASVENIT RGVSNIQAHS DGGDDDGCGG 300 DDADDGFREE VEAGDDDDDN AIQPMGKTGG RGIGRXNRGG RGRSVGRGGR GGVTDDGGKS 360 ATYWSTDEQM LLVKCKREQE MHLAGLGHNY DRMRTKEWKW VDIAKRMANG GSPKDADDCM 420 KKWDNLFQNY KKIQRFQNAS GRPDFFKLSN DERKEHNFKF PMERVLYNEI HSGMLGNHTI 480 FPPNIADTGS PDGVQLPRRG AGGGESVDSE GGGDGCPEER SSARDSDVNA CSVAGGGKCK 540 NARQQALESI ADVMDRHGEL MSSTIESSSK RQCSISSRQC DIQERQCDIL AQEVAVQKAH 600 YAASDETQRM MCHALLEIAA AIRGRLTISV ASMSTRGSAC GTKRDAAAAV GLVQAKGRRH 660 IPKSKKVRSG GASGNVPARG SEGWATAAEM ESHDDFGMEE PKAEATASAV GQSARQRASD 720 HTQSCTRFHS PVDDYTLPEK EVAPERRTIE GEAAGAAGGT ATVNSAPVAM AREEAAVAAT 780 AREDERGEKT THREGNDVGP SRVRKETMSR ELIDRALLWV DDKAFKTTGE GRRLYNIIHE 840 TRKYLVAIAS GLPATVVSRS VILPKSSMRV ARISDPSQLQ QAISRAAKVE NVALRVLRGW 900 VFKSGNRARG YNLAYQYALE SVATDIVRAM WYAEDSSNVV SAPICGHTID LNMDLSLWFA 960 GAHIDDRPDD DDMAAYQESI VICIAQAFRA AVQMGAHIDG DFISYDRLCR VADCFRLLLA 1020 VAMWIIRMAG DDFRSHYEAF YSVNLLARPT LVASMHRSFD HRRSVVRAAK AVTERLGKAN 1080 PTFGEHPEYI PQWAPCGITF GHDASVTGPE DCKRLDWLGP GPPDDDGDDD KKEGA

Sequence ? help Back to Top

Protein Sequence Length: 1135 aa Download sequence

MADLQRRLPL LLLVVVVFLF VVFLHVCLSC RPWKQHRKRR ASTKRVVLQG ERPMAGMKAC  60
AILPAAEGGR RPATTEPSRR YDPSMYSHLP SWETPLPPSD EESEGDELPT FPLASGSTQL  120
LSQTVLVGGS ASNEQGEYTS LLQQGLGDDD DGGVDLRFGL SSGGAREASR TVITAAHASA  180
GGLQQPRREQ TGPSTVRGGA SVIGGVGSSP TARQHVSSAP SGERLTDNWD VRTAAAAASL  240
RTSGARSSML NRTTPAPPEG RDEGACRPPA GSGASVENIT RGVSNIQAHS DGGDDDGCGG  300
DDADDGFREE VEAGDDDDDN AIQPMGKTGG RGIGRXNRGG RGRSVGRGGR GGVTDDGGKS  360
ATYWSTDEQM LLVKCKREQE MHLAGLGHNY DRMRTKEWKW VDIAKRMANG GSPKDADDCM  420
KKWDNLFQNY KKIQRFQNAS GRPDFFKLSN DERKEHNFKF PMERVLYNEI HSGMLGNHTI  480
FPPNIADTGS PDGVQLPRRG AGGGESVDSE GGGDGCPEER SSARDSDVNA CSVAGGGKCK  540
NARQQALESI ADVMDRHGEL MSSTIESSSK RQCSISSRQC DIQERQCDIL AQEVAVQKAH  600
YAASDETQRM MCHALLEIAA AIRGRLTISV ASMSTRGSAC GTKRDAAAAV GLVQAKGRRH  660
IPKSKKVRSG GASGNVPARG SEGWATAAEM ESHDDFGMEE PKAEATASAV GQSARQRASD  720
HTQSCTRFHS PVDDYTLPEK EVAPERRTIE GEAAGAAGGT ATVNSAPVAM AREEAAVAAT  780
AREDERGEKT THREGNDVGP SRVRKETMSR ELIDRALLWV DDKAFKTTGE GRRLYNIIHE  840
TRKYLVAIAS GLPATVVSRS VILPKSSMRV ARISDPSQLQ QAISRAAKVE NVALRVLRGW  900
VFKSGNRARG YNLAYQYALE SVATDIVRAM WYAEDSSNVV SAPICGHTID LNMDLSLWFA  960
GAHIDDRPDD DDMAAYQESI VICIAQAFRA AVQMGAHIDG DFISYDRLCR VADCFRLLLA  1020
VAMWIIRMAG DDFRSHYEAF YSVNLLARPT LVASMHRSFD HRRSVVRAAK AVTERLGKAN  1080
PTFGEHPEYI PQWAPCGITF GHDASVTGPE DCKRLDWLGP GPPDDDGDDD KKEGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-06	Trihelix family protein