PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91506.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

C2H2

Protein Properties

Length: 459aa MW: 50813.9 Da PI: 5.2004

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.2e-05	111	135	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cgk+F+ L++H +H GBG91506.1 111 YVCAfeGCGKVFTEAAALRKHAHVH 135 89*******************9887 PP
2	zf-C2H2	19.7	2.2e-06	140	164	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk+F ++s LkrH H GBG91506.1 140 YVCHyeGCGKRFVDSSKLKRHFLIH 164 9********************8877 PP
3	zf-C2H2	22.7	2.5e-07	170	194	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H+rtH GBG91506.1 170 FVCPfeGCGKAFSLDFNLRSHMRTH 194 89**********************9 PP
4	zf-C2H2	18.2	6.9e-06	200	224	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dCgk++ + + L+ Hi++H GBG91506.1 200 HPCPyaDCGKRYAHEYKLRAHIKSH 224 68**********************6 PP
5	zf-C2H2	14.4	0.00011	273	297	2	23
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 Cp Cgk++ + + L+ H+r+ H GBG91506.1 273 GCPfeGCGKRYIHEYKLNLHLRKeH 297 59999******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MAPPADRSAP PMGKLEMVRG SEKSVGGDAG ADGNGMTSDD GMGAGEGDIV PRKQVARKWF 60 RKWVVQDTVL NSGKCFVLKW IREDMVAAQK PVAPPPMPAV QSPEHDQGVV YVCAFEGCGK 120 VFTEAAALRK HAHVHGEKQY VCHYEGCGKR FVDSSKLKRH FLIHTGEKHF VCPFEGCGKA 180 FSLDFNLRSH MRTHTGENYH PCPYADCGKR YAHEYKLRAH IKSHHEKESK HSHQSERALL 240 AIAGSGGAGG LGGQIVATSG GNPPSAAGER PFGCPFEGCG KRYIHEYKLN LHLRKEHAQD 300 VGDMMMDDSG GTRARGSNPD HPADANRGGM LEIGYDDNPN HHEGGYGGYS EAEDDDGSDL 360 GEMQLRGDVN LGHNGGDDRP VHAHLGQKQP RDNIHHVDLN ERQLITEYGY RLSDAEREDS 420 EETEEEEREE FDGDHEMVER EYEDVVEEED DEETEEEMD

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MAPPADRSAP PMGKLEMVRG SEKSVGGDAG ADGNGMTSDD GMGAGEGDIV PRKQVARKWF  60
RKWVVQDTVL NSGKCFVLKW IREDMVAAQK PVAPPPMPAV QSPEHDQGVV YVCAFEGCGK  120
VFTEAAALRK HAHVHGEKQY VCHYEGCGKR FVDSSKLKRH FLIHTGEKHF VCPFEGCGKA  180
FSLDFNLRSH MRTHTGENYH PCPYADCGKR YAHEYKLRAH IKSHHEKESK HSHQSERALL  240
AIAGSGGAGG LGGQIVATSG GNPPSAAGER PFGCPFEGCG KRYIHEYKLN LHLRKEHAQD  300
VGDMMMDDSG GTRARGSNPD HPADANRGGM LEIGYDDNPN HHEGGYGGYS EAEDDDGSDL  360
GEMQLRGDVN LGHNGGDDRP VHAHLGQKQP RDNIHHVDLN ERQLITEYGY RLSDAEREDS  420
EETEEEEREE FDGDHEMVER EYEDVVEEED DEETEEEMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	3e-80	C2H2 family protein