PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG91069.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 415aa    MW: 45488.2 Da    PI: 8.68
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG91069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.21e-13270346271
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                 W  +e l+L++ +r       ++++++ r+k k ++W +++k+m+++g++r  +qC ++wen+ + y+k+ ++ek+ 
  GBG91069.1 270 WNLNESLVLVRCKRdqddyfaNVGTNFARTKTKDQKWMDIAKRMEKEGVRRDGEQCMKRWENIFGWYRKVWDREKDS 346
                 9999**********55555555555666789******************************************9984 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MGRGGYGGGS GMQHNVHHRF DPNLYSHLPP HQQPLPDDTT WSPPPSTLDL AWGSTQTSYN  60
TPARVESTGG GVGPMSALLG ETRGGGRLPF DLQLSPATTM DVSRTILVQQ SGHGGGTSTQ  120
TMHAIDLDDG MSMHRPNHVS RPAPSQAGPA ASVSYHQPTA GTTMQERRPD LGGVAESPRC  180
VERIVCRFNS LRATSDGDGA RPNGGASEAD RIDVEDGDGH DYEEDKASVK EAASNGTKKK  240
ASKGRGKANG KDKEGDRNDE GGGSSARGNW NLNESLVLVR CKRDQDDYFA NVGTNFARTK  300
TKDQKWMDIA KRMEKEGVRR DGEQCMKRWE NIFGWYRKVW DREKDSRLQS YFLMSTKARK  360
EKGYRFNLDR TLYDAIHIMQ GNNQVVHPPN LVDAGNRQGQ QPQLLSSSST ACRTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.16e-10Trihelix family protein