PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG91032.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 723aa MW: 79199.4 Da PI: 5.202

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG91032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.6	1.6e-08	311	385	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e ++L++ +re e +l r k+ +W++++k+m+ g + ++ C +kw+n+ + ykk + +++ GBG91032.1 311 WSPKEQMQLVRCKREQEMHLAglghnygRMWTKEWKWDDIAKRMANAGRPKDAEDCMKKWDNIFQNYKKGRGRRR 385 999*********77777763322222455***********************************9877665 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MAGMQARAVP PAGEGGRKPA TTEPSRRYDP SMYNHLPSWE MPLPPSDEES EGDELPTFPL 60 ASGSTQLLSQ TVLTGGSASN GRGEYMTLLQ QGLGDDDDXG VDLRFGLCSG GSREPSRTFI 120 IDADPSPRGV QQSGSRHTEQ SSLRGGAPVT DGVGPSALGR QHGSSAPSAD RLTSTCPARH 180 VVAVESLRIG GTLHSTLKTT TPAQLDLRDD GMCRPAVRPA PSVEKITREV SNMRAHSEGG 240 DDDGGGGDDA DERFGEDVEA GDDDDDILIR PLGKTRGRGR GRSRGAVRGR SVGRGGRGGV 300 NDDGGKSATY WSPKEQMQLV RCKREQEMHL AGLGHNYGRM WTKEWKWDDI AKRMANAGRP 360 KDAEDCMKKW DNIFQNYKKG RGRRRAPEAK RLRTEDVSAG VPRRGAQGWA AAAEGDYDDE 420 FTTEEEQAEA TTSEVPESGR GRSSDHTASK RMMTPPPEAQ HLRGRETRTE KAPVVDLGGD 480 DDEPLERRRI RIRTTATPSP EVTVRSLESF ATDIERAMWY GEEWCDVVSP AVCAHTIDLS 540 MDLPLWFAGA NIEDRPNDDD MVAHQESTFI CVAYAFRVAV QMGPLIDGEF ISHEHLCWVA 600 DCFRLLLAAC MWIMRTAGDD PRSHCEAYYF ADLVAKPTLV VAMHRSFDHR RSVVRAVKVV 660 TERLEKANAT FGQHPDYISH WAPSDIGFRR DASITGPEDA KKLDWLGSGP PDDDNNNDGK 720 DDA

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MAGMQARAVP PAGEGGRKPA TTEPSRRYDP SMYNHLPSWE MPLPPSDEES EGDELPTFPL  60
ASGSTQLLSQ TVLTGGSASN GRGEYMTLLQ QGLGDDDDXG VDLRFGLCSG GSREPSRTFI  120
IDADPSPRGV QQSGSRHTEQ SSLRGGAPVT DGVGPSALGR QHGSSAPSAD RLTSTCPARH  180
VVAVESLRIG GTLHSTLKTT TPAQLDLRDD GMCRPAVRPA PSVEKITREV SNMRAHSEGG  240
DDDGGGGDDA DERFGEDVEA GDDDDDILIR PLGKTRGRGR GRSRGAVRGR SVGRGGRGGV  300
NDDGGKSATY WSPKEQMQLV RCKREQEMHL AGLGHNYGRM WTKEWKWDDI AKRMANAGRP  360
KDAEDCMKKW DNIFQNYKKG RGRRRAPEAK RLRTEDVSAG VPRRGAQGWA AAAEGDYDDE  420
FTTEEEQAEA TTSEVPESGR GRSSDHTASK RMMTPPPEAQ HLRGRETRTE KAPVVDLGGD  480
DDEPLERRRI RIRTTATPSP EVTVRSLESF ATDIERAMWY GEEWCDVVSP AVCAHTIDLS  540
MDLPLWFAGA NIEDRPNDDD MVAHQESTFI CVAYAFRVAV QMGPLIDGEF ISHEHLCWVA  600
DCFRLLLAAC MWIMRTAGDD PRSHCEAYYF ADLVAKPTLV VAMHRSFDHR RSVVRAVKVV  660
TERLEKANAT FGQHPDYISH WAPSDIGFRR DASITGPEDA KKLDWLGSGP PDDDNNNDGK  720
DDA