PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG90709.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 492aa    MW: 53151.9 Da    PI: 6.0081
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG90709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.88.8e-11237311269
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+   + aL++a+r        m++++ r k ++ +We+v  ++++ g++r ++ C++kw+nl +++ k+ + ++
  GBG90709.1 237 WSVGDTAALVRAKRdqdlyiaGMGTSFTRMKTAAWKWEDVRVRLQAMGVTRDAVDCEKKWDNLMQQFMKVHKFQN 311
                 899999********9999999999*******************************************99987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MAGRLPNGRP AGTSGGSINR QRSAGSVAKQ PYDPRLYAHL PSHEIPLPPS DDEGGEARSP  60
TLPLGSGSTQ DWASTQSCGG RGVGTSWSYT SLLNEGLCDD DGDAAVDLSF HLSSSSGAAA  120
THTRIINPHP GGDCAENTQG AVWPECRQEL HRGETETITR GVQRLHIDEV ENAAVDEGQG  180
CGDVDGEDGC KSDDLPDIRP LGRRATRGGS GAKKGPAMKP RRTKNMDDDG EGGRNFWSVG  240
DTAALVRAKR DQDLYIAGMG TSFTRMKTAA WKWEDVRVRL QAMGVTRDAV DCEKKWDNLM  300
QQFMKVHKFQ NLSGGKDYFR LASRERRSKG FSFVMDRSVY DEMEAMTKGD RTIHPANLAD  360
TGAAGGVQMP AGARGDGGTM GADGGGETTD EEQELTKDSS FSAGRGGGYG KRKNMRQQTF  420
EAVADVMEKH GALMASTMDS ASKRQCSVMS RQCEILESEV EVQRKHYAEA DEANRMMCNA  480
LLEIAKAIRE RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-08Trihelix family protein