PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG90399.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 577aa MW: 59705.4 Da PI: 7.5255

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG90399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.3	4.1e-08	290	329	19	58
trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenln 58 + + + k ++++ e+++++++e+g++r+++ C++kw +l+ GBG90399.1 290 NGVHKHKTRGKRYEWIADRLKEEGYNRTAEDCRKKWTKLK 329 4455678999***************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MEGRRFTSEL MGEYDDAMDS DRSGVEDIAG TQMDRGGGVX RGSARQWPRT XFXNEGFQPG 60 AQQSQYTSAP PSSRGGHAGG GAGAGVRGSS SLYGRQAVQM HDESIGVYPP AELPSSARGG 120 AVGNDDRSAA WAPGSSQGMA HSPYGSVMSC GVTGPRRSSP GGRMENVVMA DHVERHGERT 180 AFAVEGWHGK TTAMHLGDEA VASSTPSRSG GPAGNVTGKR TADDAVGEGS VMRGDVGRSA 240 EDTASGQKKQ RARRAPRAEG GKKNNPWTLE ERIALGRTCV KDDALMADAN GVHKHKTRGK 300 RYEWIADRLK EEGYNRTAED CRKKWTKLKE IVSQIGDKCY RSGEAGYFNM TTEQRREKDV 360 CTTFEEPLWD AMEWWRLKKS YTCDATLASE DLAGGGGSGS GRSDGGSDGG EGGGGNLSGQ 420 GQGGTGPGLA GGGSRSGEIG GGIGTREGGV GGGSTRGGGV ASDGSGTDAS DTSGRSRKTS 480 SGRVRGDAPA SSSSTRTTME DSTKTLCEGL DKASGTQARS TCEGAAMMST KIGDVAVQIG 540 AVTGAMHEGN AVLQSLVAVM VARSSNSTRG RGENDPS

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MEGRRFTSEL MGEYDDAMDS DRSGVEDIAG TQMDRGGGVX RGSARQWPRT XFXNEGFQPG  60
AQQSQYTSAP PSSRGGHAGG GAGAGVRGSS SLYGRQAVQM HDESIGVYPP AELPSSARGG  120
AVGNDDRSAA WAPGSSQGMA HSPYGSVMSC GVTGPRRSSP GGRMENVVMA DHVERHGERT  180
AFAVEGWHGK TTAMHLGDEA VASSTPSRSG GPAGNVTGKR TADDAVGEGS VMRGDVGRSA  240
EDTASGQKKQ RARRAPRAEG GKKNNPWTLE ERIALGRTCV KDDALMADAN GVHKHKTRGK  300
RYEWIADRLK EEGYNRTAED CRKKWTKLKE IVSQIGDKCY RSGEAGYFNM TTEQRREKDV  360
CTTFEEPLWD AMEWWRLKKS YTCDATLASE DLAGGGGSGS GRSDGGSDGG EGGGGNLSGQ  420
GQGGTGPGLA GGGSRSGEIG GGIGTREGGV GGGSTRGGGV ASDGSGTDAS DTSGRSRKTS  480
SGRVRGDAPA SSSSTRTTME DSTKTLCEGL DKASGTQARS TCEGAAMMST KIGDVAVQIG  540
AVTGAMHEGN AVLQSLVAVM VARSSNSTRG RGENDPS