PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG90174.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 310aa    MW: 34365.1 Da    PI: 10.9522
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG90174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.13e-1041113267
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 
                 W+ ++  +Li+a+r+ + +l+++       ++++ +W +v +++ +  + r   +C +kw+nl +++kki + 
  GBG90174.1  41 WSVDHMVTLIRAKRDQDAQLQAAghxfarmQSREWKWLDVRERLLKVXVXRRTDKCGKKWBNLMQQFKKIHTF 113
                 999***********9999999753333333699************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGGRGGRGRA STNVGRRWKR PSATSADAEG EGDGEGGRNF WSVDHMVTLI RAKRDQDAQL  60
QAAGHXFARM QSREWKWLDV RERLLKVXVX RRTDKCGKKW BNLMQQFKKI HTFMGMSGKE  120
DFFQLTSQQR AEKGFSFNMD RAVYEEIKGV KERSHTISPS NVADTGGAGG VQLRSAYRVV  180
AVSSSSPSSS SVFSAMTNTR NSGKGKRERD SQKTKAASVV KWGRHQAKKP KASSDGALVI  240
GRSAREEWVT EASSGQDDDF ESEAETFHGR KAMKHPQTRP RGRARIADPN GSASAAYLVR  300
TADPILHEFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-06Trihelix family protein